RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
CHMP6-203ENST00000572525 TTLL6Q8N841 843 aa14.07□□□□□ -0.16
CHMP6-203ENST00000572525 POLKQ9UBT6 870 aa14.07□□□□□ -0.16
CHMP6-203ENST00000572525 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
CHMP6-203ENST00000572525 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
CHMP6-203ENST00000572525 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
CHMP6-203ENST00000572525 UBR2Q8IWV8 1755 aa14.06□□□□□ -0.16
CHMP6-203ENST00000572525 CABP4P57796 275 aa14.06□□□□□ -0.16
CHMP6-203ENST00000572525 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
CHMP6-203ENST00000572525 CARD14Q9BXL6 1004 aa14.06□□□□□ -0.16
CHMP6-203ENST00000572525 LTBP3Q9NS15 1303 aa14.06□□□□□ -0.16
CHMP6-203ENST00000572525 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 NFKBIEO00221 500 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 FOXN1O15353 648 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-203ENST00000572525 ZPR1O75312 459 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-203ENST00000572525 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
CHMP6-203ENST00000572525 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 SOS1Q07889 1333 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-203ENST00000572525 MRC1P22897 1456 aa14.05□□□□□ -0.16
CHMP6-203ENST00000572525 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
CHMP6-203ENST00000572525 INTS5Q6P9B9 1019 aaKnown RBP14.04□□□□□ -0.16
CHMP6-203ENST00000572525 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
CHMP6-203ENST00000572525 PDE4DIPQ5VU43 2346 aa14.04□□□□□ -0.16
CHMP6-203ENST00000572525 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
CHMP6-203ENST00000572525 ZNF530Q6P9A1 599 aaPredicted RBP14.03□□□□□ -0.16
CHMP6-203ENST00000572525 PASKQ96RG2 1323 aa14.03□□□□□ -0.16
CHMP6-203ENST00000572525 COL15A1P39059 1388 aa14.02□□□□□ -0.17
CHMP6-203ENST00000572525 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
CHMP6-203ENST00000572525 NFIXQ14938 502 aa14.02□□□□□ -0.17
CHMP6-203ENST00000572525 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.17
CHMP6-203ENST00000572525 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
CHMP6-203ENST00000572525 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
CHMP6-203ENST00000572525 H0YIN7 160 aa14.01□□□□□ -0.17
CHMP6-203ENST00000572525 MTHFSP49914 203 aa14.01□□□□□ -0.17
CHMP6-203ENST00000572525 AIDAQ96BJ3 306 aa14.01□□□□□ -0.17
CHMP6-203ENST00000572525 MKRN1Q9UHC7 482 aaKnown RBP14.01□□□□□ -0.17
CHMP6-203ENST00000572525 TRPM7Q96QT4 1865 aa14□□□□□ -0.17
CHMP6-203ENST00000572525 SERPINB2P05120 415 aa14□□□□□ -0.17
CHMP6-203ENST00000572525 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
CHMP6-203ENST00000572525 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
CHMP6-203ENST00000572525 WBP1LQ9NX94 342 aa14□□□□□ -0.17
CHMP6-203ENST00000572525 IQCA1LA6NCM1 817 aa13.99□□□□□ -0.17
CHMP6-203ENST00000572525 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
CHMP6-203ENST00000572525 LDHDQ86WU2 507 aa13.99□□□□□ -0.17
CHMP6-203ENST00000572525 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
CHMP6-203ENST00000572525 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
CHMP6-203ENST00000572525 BCORQ6W2J9 1755 aa13.99□□□□□ -0.17
CHMP6-203ENST00000572525 CARMIL3Q8ND23 1372 aa13.98□□□□□ -0.17
CHMP6-203ENST00000572525 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
CHMP6-203ENST00000572525 RGS19P49795 217 aa13.98□□□□□ -0.17
CHMP6-203ENST00000572525 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
CHMP6-203ENST00000572525 SOGA3Q5TF21 947 aa13.97□□□□□ -0.17
CHMP6-203ENST00000572525 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
CHMP6-203ENST00000572525 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
CHMP6-203ENST00000572525 PDE6BP35913 854 aa13.96□□□□□ -0.17
CHMP6-203ENST00000572525 DNAJC10Q8IXB1 793 aa13.96□□□□□ -0.17
CHMP6-203ENST00000572525 ABHD8Q96I13 439 aa13.96□□□□□ -0.17
CHMP6-203ENST00000572525 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.17
CHMP6-203ENST00000572525 TAOK3Q9H2K8 898 aa13.96□□□□□ -0.17
CHMP6-203ENST00000572525 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
CHMP6-203ENST00000572525 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
CHMP6-203ENST00000572525 VEGFBP49765 207 aa13.95□□□□□ -0.18
CHMP6-203ENST00000572525 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
CHMP6-203ENST00000572525 SLC52A2Q9HAB3 445 aa13.95□□□□□ -0.18
CHMP6-203ENST00000572525 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
CHMP6-203ENST00000572525 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
CHMP6-203ENST00000572525 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
CHMP6-203ENST00000572525 HSPA8P11142 646 aaKnown RBP13.94□□□□□ -0.18
CHMP6-203ENST00000572525 LBX1P52954 281 aa13.94□□□□□ -0.18
CHMP6-203ENST00000572525 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
CHMP6-203ENST00000572525 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
CHMP6-203ENST00000572525 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
CHMP6-203ENST00000572525 ZBTB1Q9Y2K1 713 aa13.94□□□□□ -0.18
CHMP6-203ENST00000572525 A0A087WZG4 1122 aa13.93□□□□□ -0.18
CHMP6-203ENST00000572525 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
CHMP6-203ENST00000572525 C21orf2O43822 256 aa13.92□□□□□ -0.18
CHMP6-203ENST00000572525 EIF5P55010 431 aaKnown RBP13.92□□□□□ -0.18
CHMP6-203ENST00000572525 MLLT1Q03111 559 aaPredicted RBP13.92□□□□□ -0.18
CHMP6-203ENST00000572525 STYK1Q6J9G0 422 aa13.92□□□□□ -0.18
CHMP6-203ENST00000572525 CNKSR1Q969H4 720 aa13.92□□□□□ -0.18
CHMP6-203ENST00000572525 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
CHMP6-203ENST00000572525 PRR5LQ6MZQ0 368 aa13.9□□□□□ -0.18
CHMP6-203ENST00000572525 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
CHMP6-203ENST00000572525 AEBP1Q8IUX7 1158 aa13.9□□□□□ -0.18
CHMP6-203ENST00000572525 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHMP6-203ENST00000572525 STARD3NLO95772 234 aa13.89□□□□□ -0.19
CHMP6-203ENST00000572525 SRGNP10124 158 aa13.89□□□□□ -0.19
CHMP6-203ENST00000572525 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
CHMP6-203ENST00000572525 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
CHMP6-203ENST00000572525 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
CHMP6-203ENST00000572525 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
CHMP6-203ENST00000572525 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
CHMP6-203ENST00000572525 WDR33Q9C0J8 1336 aaKnown RBP13.88□□□□□ -0.19
CHMP6-203ENST00000572525 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
CHMP6-203ENST00000572525 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
CHMP6-203ENST00000572525 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
CHMP6-203ENST00000572525 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
CHMP6-203ENST00000572525 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms