RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 GLI3P10071 1580 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 PI4KAP2A4QPH2 592 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 ANKRD44Q8N8A2 993 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 PI4KAP1Q8N8J0 262 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 GCC1Q96CN9 775 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 TMOD3Q9NYL9 352 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 PAPPAQ13219 1627 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 ADCY9O60503 1353 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 PDE4AP27815 886 aa25.79■■□□□ 1.72
CHRNE-202ENST00000572438 GNAI3P08754 354 aa25.78■■□□□ 1.72
CHRNE-202ENST00000572438 CEP85Q6P2H3 762 aa25.78■■□□□ 1.72
CHRNE-202ENST00000572438 SRCIN1Q9C0H9 1055 aa25.78■■□□□ 1.72
CHRNE-202ENST00000572438 USP16Q9Y5T5 823 aa25.78■■□□□ 1.72
CHRNE-202ENST00000572438 KCPQ6ZWJ8 1503 aa25.77■■□□□ 1.72
CHRNE-202ENST00000572438 UBR2Q8IWV8 1755 aa25.77■■□□□ 1.72
CHRNE-202ENST00000572438 SPATA31A6Q5VVP1 1343 aa25.77■■□□□ 1.72
CHRNE-202ENST00000572438 KSR2Q6VAB6 950 aa25.77■■□□□ 1.72
CHRNE-202ENST00000572438 GNAI2P04899 355 aa25.76■■□□□ 1.71
CHRNE-202ENST00000572438 BEND3Q5T5X7 828 aa25.76■■□□□ 1.71
CHRNE-202ENST00000572438 UNC5CLQ8IV45 518 aa25.76■■□□□ 1.71
CHRNE-202ENST00000572438 BACH2Q9BYV9 841 aa25.76■■□□□ 1.71
CHRNE-202ENST00000572438 LRP6O75581 1613 aa25.76■■□□□ 1.71
CHRNE-202ENST00000572438 NUCB1Q02818 461 aa25.75■■□□□ 1.71
CHRNE-202ENST00000572438 DDX58O95786 925 aaKnown RBP25.74■■□□□ 1.71
CHRNE-202ENST00000572438 BARGINQ6ZT62 677 aa25.74■■□□□ 1.71
CHRNE-202ENST00000572438 NGLY1Q96IV0 654 aa25.74■■□□□ 1.71
CHRNE-202ENST00000572438 C8orf37Q96NL8 207 aa25.74■■□□□ 1.71
CHRNE-202ENST00000572438 USP44Q9H0E7 712 aa25.74■■□□□ 1.71
CHRNE-202ENST00000572438 MAP3K2Q9Y2U5 619 aa25.74■■□□□ 1.71
CHRNE-202ENST00000572438 CCDC9Q9Y3X0 531 aaKnown RBP25.74■■□□□ 1.71
CHRNE-202ENST00000572438 DDB1Q16531 1140 aa25.73■■□□□ 1.71
CHRNE-202ENST00000572438 PIGBQ92521 554 aa25.73■■□□□ 1.71
CHRNE-202ENST00000572438 LAMB4A4D0S4 1761 aa25.73■■□□□ 1.71
CHRNE-202ENST00000572438 MYL6BP14649 208 aa25.72■■□□□ 1.71
CHRNE-202ENST00000572438 ERBB4Q15303 1308 aa25.72■■□□□ 1.71
CHRNE-202ENST00000572438 ILDR1Q86SU0 546 aaPredicted RBP25.72■■□□□ 1.71
CHRNE-202ENST00000572438 DCTPP1Q9H773 170 aa25.72■■□□□ 1.71
CHRNE-202ENST00000572438 LRP10Q7Z4F1 713 aa25.71■■□□□ 1.71
CHRNE-202ENST00000572438 CHD1LQ86WJ1 897 aa25.71■■□□□ 1.71
CHRNE-202ENST00000572438 BCL9LQ86UU0 1499 aa25.71■■□□□ 1.71
CHRNE-202ENST00000572438 PTCD1O75127 700 aaKnown RBP25.7■■□□□ 1.71
CHRNE-202ENST00000572438 AIMP1Q12904 312 aaKnown RBP25.7■■□□□ 1.71
CHRNE-202ENST00000572438 FAM161AQ3B820 660 aa25.7■■□□□ 1.71
CHRNE-202ENST00000572438 HMMRO75330 724 aa25.7■■□□□ 1.7
CHRNE-202ENST00000572438 ALDH1L1O75891 902 aa25.7■■□□□ 1.7
CHRNE-202ENST00000572438 UBTFL1P0CB47 393 aaPredicted RBP25.7■■□□□ 1.7
CHRNE-202ENST00000572438 VPS72Q15906 364 aa25.7■■□□□ 1.7
CHRNE-202ENST00000572438 FNBP4Q8N3X1 1017 aaPredicted RBP25.7■■□□□ 1.7
CHRNE-202ENST00000572438 XAGE3Q8WTP9 111 aa25.7■■□□□ 1.7
CHRNE-202ENST00000572438 BCL9O00512 1426 aa25.69■■□□□ 1.7
CHRNE-202ENST00000572438 ANKRD45Q5TZF3 282 aa25.68■■□□□ 1.7
CHRNE-202ENST00000572438 COPS6Q7L5N1 327 aa25.68■■□□□ 1.7
CHRNE-202ENST00000572438 ATG3Q9NT62 314 aa25.67■■□□□ 1.7
CHRNE-202ENST00000572438 ASAP1Q9ULH1 1129 aa25.67■■□□□ 1.7
CHRNE-202ENST00000572438 LNPKQ9C0E8 428 aa25.67■■□□□ 1.7
CHRNE-202ENST00000572438 LRRFIP2Q9Y608 721 aaKnown RBP25.67■■□□□ 1.7
CHRNE-202ENST00000572438 C8orf34Q49A92 452 aa25.66■■□□□ 1.7
CHRNE-202ENST00000572438 RIC3Q7Z5B4 369 aa25.66■■□□□ 1.7
CHRNE-202ENST00000572438 ITGB4P16144 1822 aa25.66■■□□□ 1.7
CHRNE-202ENST00000572438 PIP4K2AP48426 406 aaPredicted RBP25.65■■□□□ 1.7
CHRNE-202ENST00000572438 VSIG10Q8N0Z9 540 aa25.65■■□□□ 1.7
CHRNE-202ENST00000572438 LINS1Q8NG48 757 aa25.65■■□□□ 1.7
CHRNE-202ENST00000572438 ATP8B2P98198 1209 aa25.65■■□□□ 1.7
CHRNE-202ENST00000572438 NBPF26B4DH59 902 aa25.64■■□□□ 1.7
CHRNE-202ENST00000572438 NBPF14Q5TI25 921 aa25.64■■□□□ 1.7
CHRNE-202ENST00000572438 NBPF10Q6P3W6 841 aaKnown RBP25.64■■□□□ 1.7
CHRNE-202ENST00000572438 NBPF15Q8N660 670 aa25.64■■□□□ 1.7
CHRNE-202ENST00000572438 MARCH10Q8NA82 808 aaPredicted RBP25.64■■□□□ 1.7
CHRNE-202ENST00000572438 NBPF7P0C2Y1 421 aaPredicted RBP25.63■■□□□ 1.69
CHRNE-202ENST00000572438 ANKRD13DQ6ZTN6 518 aa25.63■■□□□ 1.69
CHRNE-202ENST00000572438 TEX13AQ9BXU3 409 aaPredicted RBP25.63■■□□□ 1.69
CHRNE-202ENST00000572438 IBTKQ9P2D0 1353 aaPredicted RBP25.62■■□□□ 1.69
CHRNE-202ENST00000572438 PRIM1P49642 420 aaKnown RBP25.62■■□□□ 1.69
CHRNE-202ENST00000572438 SYTL4Q96C24 671 aaPredicted RBP25.62■■□□□ 1.69
CHRNE-202ENST00000572438 NEXNQ0ZGT2 675 aa25.61■■□□□ 1.69
CHRNE-202ENST00000572438 CWF19L2Q2TBE0 894 aaKnown RBP25.61■■□□□ 1.69
CHRNE-202ENST00000572438 METTL22Q9BUU2 404 aaPredicted RBP25.61■■□□□ 1.69
CHRNE-202ENST00000572438 USP21Q9UK80 565 aa25.61■■□□□ 1.69
CHRNE-202ENST00000572438 DOT1LQ8TEK3 1739 aa25.61■■□□□ 1.69
CHRNE-202ENST00000572438 A1BGP04217 495 aa25.6■■□□□ 1.69
CHRNE-202ENST00000572438 FAM98CQ17RN3 349 aaKnown RBP25.6■■□□□ 1.69
CHRNE-202ENST00000572438 C9orf78Q9NZ63 289 aaPredicted RBP25.6■■□□□ 1.69
CHRNE-202ENST00000572438 PNMA6EA0A0J9YXQ4 647 aa25.59■■□□□ 1.69
CHRNE-202ENST00000572438 RBM42Q9BTD8 480 aaKnown RBP25.59■■□□□ 1.69
CHRNE-202ENST00000572438 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
CHRNE-202ENST00000572438 IGKV5-2P06315 115 aa25.58■■□□□ 1.69
CHRNE-202ENST00000572438 PLBD2Q8NHP8 589 aa25.58■■□□□ 1.69
CHRNE-202ENST00000572438 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.58■■□□□ 1.69
CHRNE-202ENST00000572438 MEX3CQ5U5Q3 659 aaKnown RBP25.58■■□□□ 1.68
CHRNE-202ENST00000572438 DNAJC10Q8IXB1 793 aa25.58■■□□□ 1.68
CHRNE-202ENST00000572438 MYD88Q99836 296 aa25.58■■□□□ 1.68
CHRNE-202ENST00000572438 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.68
CHRNE-202ENST00000572438 UTYO14607 1347 aa25.57■■□□□ 1.68
CHRNE-202ENST00000572438 NEURL1BA8MQ27 555 aa25.56■■□□□ 1.68
CHRNE-202ENST00000572438 GRM8O00222 908 aa25.56■■□□□ 1.68
CHRNE-202ENST00000572438 SSH3Q8TE77 659 aa25.56■■□□□ 1.68
CHRNE-202ENST00000572438 STARD3NLO95772 234 aa25.56■■□□□ 1.68
CHRNE-202ENST00000572438 POLA2Q14181 598 aa25.54■■□□□ 1.68
CHRNE-202ENST00000572438 PPP1R42Q7Z4L9 355 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms