RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 KCNA3P22001 575 aa17.3■□□□□ 0.36
ATP2A3-211ENST00000572176 TM4SF1P30408 202 aa17.3■□□□□ 0.36
ATP2A3-211ENST00000572176 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
ATP2A3-211ENST00000572176 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
ATP2A3-211ENST00000572176 AFDNP55196 1824 aaKnown RBP17.29■□□□□ 0.36
ATP2A3-211ENST00000572176 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
ATP2A3-211ENST00000572176 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
ATP2A3-211ENST00000572176 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
ATP2A3-211ENST00000572176 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 FCHSD2O94868 740 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 TEFQ10587 303 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
ATP2A3-211ENST00000572176 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
ATP2A3-211ENST00000572176 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.36
ATP2A3-211ENST00000572176 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.36
ATP2A3-211ENST00000572176 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.36
ATP2A3-211ENST00000572176 NFIXQ14938 502 aa17.26■□□□□ 0.35
ATP2A3-211ENST00000572176 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
ATP2A3-211ENST00000572176 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
ATP2A3-211ENST00000572176 STARD3NLO95772 234 aa17.25■□□□□ 0.35
ATP2A3-211ENST00000572176 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
ATP2A3-211ENST00000572176 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
ATP2A3-211ENST00000572176 CHRNA5P30532 468 aa17.24■□□□□ 0.35
ATP2A3-211ENST00000572176 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-211ENST00000572176 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
ATP2A3-211ENST00000572176 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
ATP2A3-211ENST00000572176 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
ATP2A3-211ENST00000572176 KIF3CO14782 793 aa17.23■□□□□ 0.35
ATP2A3-211ENST00000572176 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
ATP2A3-211ENST00000572176 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
ATP2A3-211ENST00000572176 A0A087WZG4 1122 aa17.22■□□□□ 0.35
ATP2A3-211ENST00000572176 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-211ENST00000572176 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATP2A3-211ENST00000572176 BCORQ6W2J9 1755 aa17.21■□□□□ 0.35
ATP2A3-211ENST00000572176 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
ATP2A3-211ENST00000572176 SERPINB2P05120 415 aa17.21■□□□□ 0.35
ATP2A3-211ENST00000572176 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
ATP2A3-211ENST00000572176 KCNQ3O43525 872 aa17.2■□□□□ 0.34
ATP2A3-211ENST00000572176 IL6STP40189 918 aaPredicted RBP17.2■□□□□ 0.34
ATP2A3-211ENST00000572176 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
ATP2A3-211ENST00000572176 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
ATP2A3-211ENST00000572176 SBF1O95248 1867 aa17.18■□□□□ 0.34
ATP2A3-211ENST00000572176 A1BGP04217 495 aa17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 HSPA6P17066 643 aa17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 MCM10Q7L590 875 aa17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
ATP2A3-211ENST00000572176 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
ATP2A3-211ENST00000572176 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
ATP2A3-211ENST00000572176 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
ATP2A3-211ENST00000572176 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
ATP2A3-211ENST00000572176 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
ATP2A3-211ENST00000572176 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
ATP2A3-211ENST00000572176 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 PRR5LQ6MZQ0 368 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
ATP2A3-211ENST00000572176 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 TOMM70O94826 608 aa17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 RASSF7Q02833 373 aa17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 TTLL6Q8N841 843 aa17.13■□□□□ 0.33
ATP2A3-211ENST00000572176 H0YIN7 160 aa17.12■□□□□ 0.33
ATP2A3-211ENST00000572176 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-211ENST00000572176 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-211ENST00000572176 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
ATP2A3-211ENST00000572176 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-211ENST00000572176 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
ATP2A3-211ENST00000572176 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
ATP2A3-211ENST00000572176 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
ATP2A3-211ENST00000572176 PDE6BP35913 854 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 PRELPP51888 382 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 CNBD1Q8NA66 436 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
ATP2A3-211ENST00000572176 NFKBIEO00221 500 aa17.09■□□□□ 0.33
ATP2A3-211ENST00000572176 LMNB1P20700 586 aa17.09■□□□□ 0.33
ATP2A3-211ENST00000572176 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
ATP2A3-211ENST00000572176 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.33
ATP2A3-211ENST00000572176 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 RGL2O15211 777 aa17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 NEFMP07197 916 aa17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-211ENST00000572176 ST5P78524 1137 aa17.07■□□□□ 0.32
ATP2A3-211ENST00000572176 ZNF652Q9Y2D9 606 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms