RNA–Protein interactions for RNA: ENST00000572010.5

SLC12A4-208, Transcript of solute carrier family 12 member 4, humanhuman

TSL 1 (best)

Gene SLC12A4, Length 1,016 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-208ENST00000572010 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
SLC12A4-208ENST00000572010 STARD3NLO95772 234 aa28.62■■■□□ 2.17
SLC12A4-208ENST00000572010 APLP1P51693 650 aa28.62■■■□□ 2.17
SLC12A4-208ENST00000572010 NFIXQ14938 502 aa28.62■■■□□ 2.17
SLC12A4-208ENST00000572010 C16orf71Q8IYS4 520 aaPredicted RBP28.62■■■□□ 2.17
SLC12A4-208ENST00000572010 COL15A1P39059 1388 aa28.62■■■□□ 2.17
SLC12A4-208ENST00000572010 MRC1P22897 1456 aa28.61■■■□□ 2.17
SLC12A4-208ENST00000572010 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
SLC12A4-208ENST00000572010 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
SLC12A4-208ENST00000572010 TEFQ10587 303 aa28.6■■■□□ 2.17
SLC12A4-208ENST00000572010 SERPINB2P05120 415 aa28.59■■■□□ 2.17
SLC12A4-208ENST00000572010 IFFO2Q5TF58 517 aa28.59■■■□□ 2.17
SLC12A4-208ENST00000572010 GAS2L2Q8NHY3 880 aa28.59■■■□□ 2.17
SLC12A4-208ENST00000572010 KDM2BQ8NHM5 1336 aa28.59■■■□□ 2.17
SLC12A4-208ENST00000572010 BRCA1P38398 1863 aaKnown RBP28.58■■■□□ 2.17
SLC12A4-208ENST00000572010 A0A087WZG4 1122 aa28.58■■■□□ 2.17
SLC12A4-208ENST00000572010 GNAT3A8MTJ3 354 aa28.58■■■□□ 2.17
SLC12A4-208ENST00000572010 TEX13AQ9BXU3 409 aaPredicted RBP28.57■■■□□ 2.16
SLC12A4-208ENST00000572010 KCPQ6ZWJ8 1503 aa28.57■■■□□ 2.16
SLC12A4-208ENST00000572010 ARFGEF1Q9Y6D6 1849 aa28.56■■■□□ 2.16
SLC12A4-208ENST00000572010 NPC1L1Q9UHC9 1359 aa28.55■■■□□ 2.16
SLC12A4-208ENST00000572010 RBM46Q8TBY0 533 aaKnown RBP28.55■■■□□ 2.16
SLC12A4-208ENST00000572010 BCL2L12Q9HB09 334 aa28.55■■■□□ 2.16
SLC12A4-208ENST00000572010 ADAMTS7Q9UKP4 1686 aa28.54■■■□□ 2.16
SLC12A4-208ENST00000572010 ZNF790Q6PG37 636 aa28.54■■■□□ 2.16
SLC12A4-208ENST00000572010 BICDL1Q6ZP65 573 aa28.54■■■□□ 2.16
SLC12A4-208ENST00000572010 NPM2Q86SE8 214 aaKnown RBP28.54■■■□□ 2.16
SLC12A4-208ENST00000572010 IL17REQ8NFR9 667 aa28.54■■■□□ 2.16
SLC12A4-208ENST00000572010 H0YIN7 160 aa28.53■■■□□ 2.16
SLC12A4-208ENST00000572010 EIF5P55010 431 aaKnown RBP28.53■■■□□ 2.16
SLC12A4-208ENST00000572010 TTLL6Q8N841 843 aa28.53■■■□□ 2.16
SLC12A4-208ENST00000572010 ZNF496Q96IT1 587 aaPredicted RBP28.53■■■□□ 2.16
SLC12A4-208ENST00000572010 C2CD5Q86YS7 1000 aa28.52■■■□□ 2.16
SLC12A4-208ENST00000572010 CFAP53Q96M91 514 aa28.51■■■□□ 2.15
SLC12A4-208ENST00000572010 RRAGCQ9HB90 399 aa28.51■■■□□ 2.15
SLC12A4-208ENST00000572010 ZNF330Q9Y3S2 320 aaPredicted RBP28.5■■■□□ 2.15
SLC12A4-208ENST00000572010 HEG1Q9ULI3 1381 aa28.5■■■□□ 2.15
SLC12A4-208ENST00000572010 FMNL2Q96PY5 1086 aa28.49■■■□□ 2.15
SLC12A4-208ENST00000572010 FSTL1Q12841 308 aa28.48■■■□□ 2.15
SLC12A4-208ENST00000572010 VIRMAQ69YN4 1812 aaKnown RBP28.48■■■□□ 2.15
SLC12A4-208ENST00000572010 LMNB1P20700 586 aa28.47■■■□□ 2.15
SLC12A4-208ENST00000572010 TBC1D2BQ9UPU7 963 aa28.47■■■□□ 2.15
SLC12A4-208ENST00000572010 NUDCQ9Y266 331 aa28.47■■■□□ 2.15
SLC12A4-208ENST00000572010 IL6STP40189 918 aaPredicted RBP28.46■■■□□ 2.15
SLC12A4-208ENST00000572010 RASSF7Q02833 373 aa28.46■■■□□ 2.15
SLC12A4-208ENST00000572010 DNAJC5GQ8N7S2 189 aa28.46■■■□□ 2.15
SLC12A4-208ENST00000572010 PDZRN3Q9UPQ7 1066 aa28.46■■■□□ 2.15
SLC12A4-208ENST00000572010 COL3A1P02461 1466 aaPredicted RBP28.46■■■□□ 2.15
SLC12A4-208ENST00000572010 ZC3H4Q9UPT8 1303 aaKnown RBP28.45■■■□□ 2.15
SLC12A4-208ENST00000572010 BTBD11A6QL63 1104 aa28.45■■■□□ 2.14
SLC12A4-208ENST00000572010 TBC1D9BQ66K14 1250 aa28.45■■■□□ 2.14
SLC12A4-208ENST00000572010 PRKAR2BP31323 418 aa28.44■■■□□ 2.14
SLC12A4-208ENST00000572010 PDE6BP35913 854 aa28.44■■■□□ 2.14
SLC12A4-208ENST00000572010 ZNF622Q969S3 477 aaKnown RBP eCLIP28.44■■■□□ 2.143e-9■■□□□ 11.5
SLC12A4-208ENST00000572010 PHACTR3Q96KR7 559 aa28.44■■■□□ 2.14
SLC12A4-208ENST00000572010 AFDNP55196 1824 aaKnown RBP28.43■■■□□ 2.14
SLC12A4-208ENST00000572010 UBR2Q8IWV8 1755 aa28.43■■■□□ 2.14
SLC12A4-208ENST00000572010 NPHP1O15259 732 aa28.43■■■□□ 2.14
SLC12A4-208ENST00000572010 BRIP1Q9BX63 1249 aa28.43■■■□□ 2.14
SLC12A4-208ENST00000572010 A1BGP04217 495 aa28.42■■■□□ 2.14
SLC12A4-208ENST00000572010 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
SLC12A4-208ENST00000572010 NRXN2Q9P2S2 1712 aa28.41■■■□□ 2.14
SLC12A4-208ENST00000572010 GLTPD2A6NH11 291 aa28.4■■■□□ 2.14
SLC12A4-208ENST00000572010 RTF1Q92541 710 aaKnown RBP28.4■■■□□ 2.14
SLC12A4-208ENST00000572010 RSPH6AQ9H0K4 717 aa28.4■■■□□ 2.14
SLC12A4-208ENST00000572010 CARMIL3Q8ND23 1372 aa28.39■■■□□ 2.14
SLC12A4-208ENST00000572010 CEMIPQ8WUJ3 1361 aa28.39■■■□□ 2.14
SLC12A4-208ENST00000572010 VEGFAP15692 232 aaPredicted RBP28.39■■■□□ 2.14
SLC12A4-208ENST00000572010 SMC1BQ8NDV3 1235 aa28.39■■■□□ 2.14
SLC12A4-208ENST00000572010 SBF1O95248 1867 aa28.38■■■□□ 2.13
SLC12A4-208ENST00000572010 KCNQ3O43525 872 aa28.38■■■□□ 2.13
SLC12A4-208ENST00000572010 U2AF1L5P0DN76 240 aaPredicted RBP28.38■■■□□ 2.13
SLC12A4-208ENST00000572010 U2AF1Q01081 240 aaKnown RBP eCLIP28.38■■■□□ 2.13
SLC12A4-208ENST00000572010 PRR5LQ6MZQ0 368 aa28.38■■■□□ 2.13
SLC12A4-208ENST00000572010 CCDC24Q8N4L8 307 aa28.37■■■□□ 2.13
SLC12A4-208ENST00000572010 DPY19L2Q6NUT2 758 aa28.36■■■□□ 2.13
SLC12A4-208ENST00000572010 DZIP3Q86Y13 1208 aaKnown RBP28.36■■■□□ 2.13
SLC12A4-208ENST00000572010 CNBD1Q8NA66 436 aa28.36■■■□□ 2.13
SLC12A4-208ENST00000572010 ZNF219Q9P2Y4 722 aaPredicted RBP28.36■■■□□ 2.13
SLC12A4-208ENST00000572010 C21orf2O43822 256 aa28.35■■■□□ 2.13
SLC12A4-208ENST00000572010 CAMTA2O94983 1202 aa28.35■■■□□ 2.13
SLC12A4-208ENST00000572010 PRELPP51888 382 aa28.35■■■□□ 2.13
SLC12A4-208ENST00000572010 ST5P78524 1137 aa28.35■■■□□ 2.13
SLC12A4-208ENST00000572010 USP16Q9Y5T5 823 aa28.35■■■□□ 2.13
SLC12A4-208ENST00000572010 NFKBIEO00221 500 aa28.34■■■□□ 2.13
SLC12A4-208ENST00000572010 HTRA3P83110 453 aa28.34■■■□□ 2.13
SLC12A4-208ENST00000572010 KLRG1Q96E93 195 aa28.34■■■□□ 2.13
SLC12A4-208ENST00000572010 SNRPA1P09661 255 aaKnown RBP28.33■■■□□ 2.13
SLC12A4-208ENST00000572010 PPP2R1AP30153 589 aa28.33■■■□□ 2.13
SLC12A4-208ENST00000572010 CNKSR1Q969H4 720 aa28.33■■■□□ 2.13
SLC12A4-208ENST00000572010 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
SLC12A4-208ENST00000572010 MCM10Q7L590 875 aa28.32■■■□□ 2.12
SLC12A4-208ENST00000572010 DLEC1Q9Y238 1755 aa28.32■■■□□ 2.12
SLC12A4-208ENST00000572010 SIPA1L3O60292 1781 aaPredicted RBP28.3■■■□□ 2.12
SLC12A4-208ENST00000572010 ERFEQ4G0M1 354 aa28.3■■■□□ 2.12
SLC12A4-208ENST00000572010 CLEC4GQ6UXB4 293 aa28.3■■■□□ 2.12
SLC12A4-208ENST00000572010 ZNF652Q9Y2D9 606 aa28.3■■■□□ 2.12
SLC12A4-208ENST00000572010 WDR90Q96KV7 1748 aa28.29■■■□□ 2.12
SLC12A4-208ENST00000572010 HTATSF1O43719 755 aaKnown RBP28.29■■■□□ 2.12
SLC12A4-208ENST00000572010 PIP4K2AP48426 406 aaPredicted RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms