RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZNF831Q5JPB2 1677 aa17.81■□□□□ 0.44
CCDC40-205ENST00000571028 PCNTO95613 3336 aa17.81■□□□□ 0.44
CCDC40-205ENST00000571028 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
CCDC40-205ENST00000571028 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
CCDC40-205ENST00000571028 GLTPD2A6NH11 291 aa17.8■□□□□ 0.44
CCDC40-205ENST00000571028 ANP32CO43423 234 aa17.8■□□□□ 0.44
CCDC40-205ENST00000571028 ZPR1O75312 459 aa17.8■□□□□ 0.44
CCDC40-205ENST00000571028 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
CCDC40-205ENST00000571028 PRKRIP1Q9H875 184 aaPredicted RBP17.8■□□□□ 0.44
CCDC40-205ENST00000571028 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-205ENST00000571028 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
CCDC40-205ENST00000571028 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
CCDC40-205ENST00000571028 MYBBP1AQ9BQG0 1328 aaKnown RBP17.78■□□□□ 0.44
CCDC40-205ENST00000571028 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
CCDC40-205ENST00000571028 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
CCDC40-205ENST00000571028 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
CCDC40-205ENST00000571028 IL13P35225 146 aa17.77■□□□□ 0.44
CCDC40-205ENST00000571028 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
CCDC40-205ENST00000571028 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
CCDC40-205ENST00000571028 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
CCDC40-205ENST00000571028 TTLL6Q8N841 843 aa17.75■□□□□ 0.43
CCDC40-205ENST00000571028 HMOX1P09601 288 aa17.74■□□□□ 0.43
CCDC40-205ENST00000571028 TM4SF1P30408 202 aa17.74■□□□□ 0.43
CCDC40-205ENST00000571028 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
CCDC40-205ENST00000571028 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
CCDC40-205ENST00000571028 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
CCDC40-205ENST00000571028 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
CCDC40-205ENST00000571028 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
CCDC40-205ENST00000571028 H0YIN7 160 aa17.72■□□□□ 0.43
CCDC40-205ENST00000571028 C2CD5Q86YS7 1000 aa17.72■□□□□ 0.43
CCDC40-205ENST00000571028 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
CCDC40-205ENST00000571028 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
CCDC40-205ENST00000571028 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC40-205ENST00000571028 INTS5Q6P9B9 1019 aaKnown RBP17.71■□□□□ 0.43
CCDC40-205ENST00000571028 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
CCDC40-205ENST00000571028 NFIXQ14938 502 aa17.7■□□□□ 0.42
CCDC40-205ENST00000571028 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
CCDC40-205ENST00000571028 SOS1Q07889 1333 aaPredicted RBP17.7■□□□□ 0.42
CCDC40-205ENST00000571028 MYH14Q7Z406 1995 aaKnown RBP17.7■□□□□ 0.42
CCDC40-205ENST00000571028 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
CCDC40-205ENST00000571028 SBF1O95248 1867 aa17.69■□□□□ 0.42
CCDC40-205ENST00000571028 SERPINB2P05120 415 aa17.69■□□□□ 0.42
CCDC40-205ENST00000571028 ERFEQ4G0M1 354 aa17.69■□□□□ 0.42
CCDC40-205ENST00000571028 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
CCDC40-205ENST00000571028 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
CCDC40-205ENST00000571028 COL15A1P39059 1388 aa17.68■□□□□ 0.42
CCDC40-205ENST00000571028 NFKBIEO00221 500 aa17.68■□□□□ 0.42
CCDC40-205ENST00000571028 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
CCDC40-205ENST00000571028 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
CCDC40-205ENST00000571028 CCDC184Q52MB2 194 aa17.67■□□□□ 0.42
CCDC40-205ENST00000571028 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC40-205ENST00000571028 TJP1Q07157 1748 aa17.67■□□□□ 0.42
CCDC40-205ENST00000571028 FOXN1O15353 648 aa17.66■□□□□ 0.42
CCDC40-205ENST00000571028 PRDM10Q9NQV6 1147 aa17.66■□□□□ 0.42
CCDC40-205ENST00000571028 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-205ENST00000571028 POTECB2RU33 542 aa17.65■□□□□ 0.42
CCDC40-205ENST00000571028 CTCFP49711 727 aaPredicted RBP17.65■□□□□ 0.42
CCDC40-205ENST00000571028 BICDL1Q6ZP65 573 aa17.65■□□□□ 0.42
CCDC40-205ENST00000571028 C21orf2O43822 256 aa17.64■□□□□ 0.41
CCDC40-205ENST00000571028 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-205ENST00000571028 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
CCDC40-205ENST00000571028 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC40-205ENST00000571028 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
CCDC40-205ENST00000571028 CNTNAP1P78357 1384 aa17.64■□□□□ 0.41
CCDC40-205ENST00000571028 NPHP1O15259 732 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 PDE6BP35913 854 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 ZBTB1Q9Y2K1 713 aa17.63■□□□□ 0.41
CCDC40-205ENST00000571028 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
CCDC40-205ENST00000571028 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
CCDC40-205ENST00000571028 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
CCDC40-205ENST00000571028 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
CCDC40-205ENST00000571028 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
CCDC40-205ENST00000571028 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
CCDC40-205ENST00000571028 A0A087WZG4 1122 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 DDNO94850 711 aaPredicted RBP17.6■□□□□ 0.41
CCDC40-205ENST00000571028 SLC34A2O95436 690 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 POTEIP0CG38 1075 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 POTEJP0CG39 1038 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 LDHDQ86WU2 507 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 BCL2L12Q9HB09 334 aa17.6■□□□□ 0.41
CCDC40-205ENST00000571028 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
CCDC40-205ENST00000571028 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
CCDC40-205ENST00000571028 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.41
CCDC40-205ENST00000571028 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 STARD3NLO95772 234 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 NEFMP07197 916 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
CCDC40-205ENST00000571028 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
CCDC40-205ENST00000571028 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
CCDC40-205ENST00000571028 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.4
CCDC40-205ENST00000571028 VEGFBP49765 207 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 LBX1P52954 281 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms