RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 GADD45BO75293 160 aaPredicted RBP17.59■□□□□ 0.41
ITGA3-216ENST00000570989 TCHHQ07283 1943 aa17.59■□□□□ 0.41
ITGA3-216ENST00000570989 KDRP35968 1356 aa17.58■□□□□ 0.41
ITGA3-216ENST00000570989 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.41
ITGA3-216ENST00000570989 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
ITGA3-216ENST00000570989 MCM2P49736 904 aa17.58■□□□□ 0.4
ITGA3-216ENST00000570989 INTS4Q96HW7 963 aaKnown RBP17.58■□□□□ 0.4
ITGA3-216ENST00000570989 TAF7LQ5H9L4 462 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 IGSF1Q8N6C5 1336 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
ITGA3-216ENST00000570989 GDPD2Q9HCC8 539 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 LTN1O94822 1766 aa17.57■□□□□ 0.4
ITGA3-216ENST00000570989 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
ITGA3-216ENST00000570989 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
ITGA3-216ENST00000570989 HOXC9P31274 260 aa17.56■□□□□ 0.4
ITGA3-216ENST00000570989 MPNDQ8N594 471 aa17.56■□□□□ 0.4
ITGA3-216ENST00000570989 TSC1Q92574 1164 aa17.56■□□□□ 0.4
ITGA3-216ENST00000570989 SYAP1Q96A49 352 aaPredicted RBP17.56■□□□□ 0.4
ITGA3-216ENST00000570989 PTPRCP08575 1304 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 CHL1O00533 1208 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
ITGA3-216ENST00000570989 NFAT5O94916 1531 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 PSME1Q06323 249 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
ITGA3-216ENST00000570989 EYA1Q99502 592 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
ITGA3-216ENST00000570989 USP48Q86UV5 1035 aa17.54■□□□□ 0.4
ITGA3-216ENST00000570989 ORAI2Q96SN7 254 aa17.54■□□□□ 0.4
ITGA3-216ENST00000570989 UBAP1LF5GYI3 381 aa17.54■□□□□ 0.4
ITGA3-216ENST00000570989 GTF2F1P35269 517 aaKnown RBP eCLIP17.54■□□□□ 0.4
ITGA3-216ENST00000570989 FOXD4L6Q3SYB3 417 aaPredicted RBP17.54■□□□□ 0.4
ITGA3-216ENST00000570989 FOXD4L3Q6VB84 417 aaPredicted RBP17.54■□□□□ 0.4
ITGA3-216ENST00000570989 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
ITGA3-216ENST00000570989 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 ANAPC15P60006 121 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 PHF14O94880 888 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 C17orf53Q8N3J3 647 aaPredicted RBP17.53■□□□□ 0.4
ITGA3-216ENST00000570989 PRIMPOLQ96LW4 560 aa17.53■□□□□ 0.4
ITGA3-216ENST00000570989 HMMRO75330 724 aa17.52■□□□□ 0.4
ITGA3-216ENST00000570989 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.4
ITGA3-216ENST00000570989 FAM184AQ8NB25 1140 aa17.52■□□□□ 0.4
ITGA3-216ENST00000570989 RPAP1Q9BWH6 1393 aaPredicted RBP17.52■□□□□ 0.39
ITGA3-216ENST00000570989 CHMLP26374 656 aa17.52■□□□□ 0.39
ITGA3-216ENST00000570989 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.39
ITGA3-216ENST00000570989 FBXO41Q8TF61 875 aa17.52■□□□□ 0.39
ITGA3-216ENST00000570989 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
ITGA3-216ENST00000570989 UPF3BQ9BZI7 483 aaKnown RBP17.51■□□□□ 0.39
ITGA3-216ENST00000570989 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
ITGA3-216ENST00000570989 SPTLC3Q9NUV7 552 aa17.51■□□□□ 0.39
ITGA3-216ENST00000570989 FOXO3O43524 673 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 MCM10Q7L590 875 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 ZSCAN20P17040 1043 aaPredicted RBP17.5■□□□□ 0.39
ITGA3-216ENST00000570989 HAP1P54257 671 aaPredicted RBP17.5■□□□□ 0.39
ITGA3-216ENST00000570989 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
ITGA3-216ENST00000570989 C19orf44Q9H6X5 657 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
ITGA3-216ENST00000570989 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
ITGA3-216ENST00000570989 ADCY5O95622 1261 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 MCCP23508 829 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 DNTTIP2Q5QJE6 756 aaKnown RBP17.49■□□□□ 0.39
ITGA3-216ENST00000570989 G2E3Q7L622 706 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 SRCIN1Q9C0H9 1055 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
ITGA3-216ENST00000570989 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 PIP4K2BP78356 416 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 DMTNQ08495 405 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 IL25Q9H293 177 aa17.49■□□□□ 0.39
ITGA3-216ENST00000570989 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
ITGA3-216ENST00000570989 F6X3S4 739 aa17.48■□□□□ 0.39
ITGA3-216ENST00000570989 FKBP5Q13451 457 aaPredicted RBP17.48■□□□□ 0.39
ITGA3-216ENST00000570989 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
ITGA3-216ENST00000570989 MX1P20591 662 aa17.48■□□□□ 0.39
ITGA3-216ENST00000570989 UTP14CQ5TAP6 766 aaKnown RBP17.48■□□□□ 0.39
ITGA3-216ENST00000570989 CRB1P82279 1406 aa17.48■□□□□ 0.39
ITGA3-216ENST00000570989 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
ITGA3-216ENST00000570989 UNC5CLQ8IV45 518 aa17.47■□□□□ 0.39
ITGA3-216ENST00000570989 KCNH5Q8NCM2 988 aa17.47■□□□□ 0.39
ITGA3-216ENST00000570989 SLIT3O75094 1523 aa17.47■□□□□ 0.39
ITGA3-216ENST00000570989 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
ITGA3-216ENST00000570989 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
ITGA3-216ENST00000570989 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
ITGA3-216ENST00000570989 IP6K1Q92551 441 aa17.46■□□□□ 0.39
ITGA3-216ENST00000570989 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
ITGA3-216ENST00000570989 ROBO1Q9Y6N7 1651 aa17.46■□□□□ 0.39
ITGA3-216ENST00000570989 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 STAP2Q9UGK3 403 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 DCCP43146 1447 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
ITGA3-216ENST00000570989 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms