RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 UBR2Q8IWV8 1755 aa28.14■■■□□ 2.1
RPA1-202ENST00000570451 COL15A1P39059 1388 aa28.14■■■□□ 2.1
RPA1-202ENST00000570451 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
RPA1-202ENST00000570451 STARD3NLO95772 234 aa28.12■■■□□ 2.09
RPA1-202ENST00000570451 ZNF790Q6PG37 636 aa28.12■■■□□ 2.09
RPA1-202ENST00000570451 ZNF526Q8TF50 670 aaPredicted RBP28.12■■■□□ 2.09
RPA1-202ENST00000570451 ZNF496Q96IT1 587 aaPredicted RBP28.12■■■□□ 2.09
RPA1-202ENST00000570451 FCHSD2O94868 740 aa28.11■■■□□ 2.09
RPA1-202ENST00000570451 NARFQ9UHQ1 456 aa28.11■■■□□ 2.09
RPA1-202ENST00000570451 POLRMTO00411 1230 aaKnown RBP28.1■■■□□ 2.09
RPA1-202ENST00000570451 ADCY9O60503 1353 aa28.1■■■□□ 2.09
RPA1-202ENST00000570451 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
RPA1-202ENST00000570451 TM4SF1P30408 202 aa28.09■■■□□ 2.09
RPA1-202ENST00000570451 GPBP1L1Q9HC44 474 aaPredicted RBP28.09■■■□□ 2.09
RPA1-202ENST00000570451 HEG1Q9ULI3 1381 aa28.09■■■□□ 2.09
RPA1-202ENST00000570451 SIPA1L3O60292 1781 aaPredicted RBP28.09■■■□□ 2.09
RPA1-202ENST00000570451 BTBD11A6QL63 1104 aa28.08■■■□□ 2.09
RPA1-202ENST00000570451 CEMIPQ8WUJ3 1361 aa28.08■■■□□ 2.09
RPA1-202ENST00000570451 ARHGAP27Q6ZUM4 889 aa28.07■■■□□ 2.08
RPA1-202ENST00000570451 RTF1Q92541 710 aaKnown RBP28.07■■■□□ 2.08
RPA1-202ENST00000570451 FMNL2Q96PY5 1086 aa28.07■■■□□ 2.08
RPA1-202ENST00000570451 ZNF330Q9Y3S2 320 aaPredicted RBP28.07■■■□□ 2.08
RPA1-202ENST00000570451 TEX13AQ9BXU3 409 aaPredicted RBP28.06■■■□□ 2.08
RPA1-202ENST00000570451 KCNA3P22001 575 aa28.05■■■□□ 2.08
RPA1-202ENST00000570451 NFIXQ14938 502 aa28.05■■■□□ 2.08
RPA1-202ENST00000570451 MCM10Q7L590 875 aa28.05■■■□□ 2.08
RPA1-202ENST00000570451 PIM2Q9P1W9 311 aa28.05■■■□□ 2.08
RPA1-202ENST00000570451 CHRNA5P30532 468 aa28.04■■■□□ 2.08
RPA1-202ENST00000570451 BCL2L12Q9HB09 334 aa28.04■■■□□ 2.08
RPA1-202ENST00000570451 A0A087WZG4 1122 aa28.03■■■□□ 2.08
RPA1-202ENST00000570451 KCNQ3O43525 872 aa28.03■■■□□ 2.08
RPA1-202ENST00000570451 EIF5P55010 431 aaKnown RBP28.03■■■□□ 2.08
RPA1-202ENST00000570451 BRCA1P38398 1863 aaKnown RBP28.02■■■□□ 2.08
RPA1-202ENST00000570451 DALRD3Q5D0E6 543 aaKnown RBP28.02■■■□□ 2.08
RPA1-202ENST00000570451 BICDL1Q6ZP65 573 aa28.02■■■□□ 2.08
RPA1-202ENST00000570451 SERPINB2P05120 415 aa28■■■□□ 2.07
RPA1-202ENST00000570451 DCTN1Q14203 1278 aa28■■■□□ 2.07
RPA1-202ENST00000570451 NPM2Q86SE8 214 aaKnown RBP28■■■□□ 2.07
RPA1-202ENST00000570451 A1BGP04217 495 aa27.99■■■□□ 2.07
RPA1-202ENST00000570451 AFDNP55196 1824 aaKnown RBP27.98■■■□□ 2.07
RPA1-202ENST00000570451 NEFMP07197 916 aa27.98■■■□□ 2.07
RPA1-202ENST00000570451 TBC1D2BQ9UPU7 963 aa27.98■■■□□ 2.07
RPA1-202ENST00000570451 IL6STP40189 918 aaPredicted RBP27.97■■■□□ 2.07
RPA1-202ENST00000570451 ARFGEF1Q9Y6D6 1849 aa27.96■■■□□ 2.07
RPA1-202ENST00000570451 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
RPA1-202ENST00000570451 TBC1D9BQ66K14 1250 aa27.94■■■□□ 2.06
RPA1-202ENST00000570451 CEP350Q5VT06 3117 aa27.94■■■□□ 2.06
RPA1-202ENST00000570451 NRXN2Q9P2S2 1712 aa27.93■■■□□ 2.06
RPA1-202ENST00000570451 PRAMEF22A3QJZ6 481 aa27.93■■■□□ 2.06
RPA1-202ENST00000570451 PIP4K2AP48426 406 aaPredicted RBP27.93■■■□□ 2.06
RPA1-202ENST00000570451 USP16Q9Y5T5 823 aa27.93■■■□□ 2.06
RPA1-202ENST00000570451 SCN7AQ01118 1682 aa27.93■■■□□ 2.06
RPA1-202ENST00000570451 C9orf131Q5VYM1 1079 aa27.92■■■□□ 2.06
RPA1-202ENST00000570451 CARMIL3Q8ND23 1372 aa27.91■■■□□ 2.06
RPA1-202ENST00000570451 SNRPA1P09661 255 aaKnown RBP27.91■■■□□ 2.06
RPA1-202ENST00000570451 C2CD5Q86YS7 1000 aa27.91■■■□□ 2.06
RPA1-202ENST00000570451 DZIP3Q86Y13 1208 aaKnown RBP27.9■■■□□ 2.06
RPA1-202ENST00000570451 TAF7Q15545 349 aaPredicted RBP27.89■■■□□ 2.06
RPA1-202ENST00000570451 MIS18AQ9NYP9 233 aa27.89■■■□□ 2.06
RPA1-202ENST00000570451 H0YIN7 160 aa27.88■■■□□ 2.05
RPA1-202ENST00000570451 NPHP1O15259 732 aa27.88■■■□□ 2.05
RPA1-202ENST00000570451 CAMTA2O94983 1202 aa27.88■■■□□ 2.05
RPA1-202ENST00000570451 CCDC24Q8N4L8 307 aa27.87■■■□□ 2.05
RPA1-202ENST00000570451 SETDB2Q96T68 719 aa27.87■■■□□ 2.05
RPA1-202ENST00000570451 RNF181Q9P0P0 153 aa27.87■■■□□ 2.05
RPA1-202ENST00000570451 MAPK8IP3Q9UPT6 1336 aa27.87■■■□□ 2.05
RPA1-202ENST00000570451 TTLL6Q8N841 843 aa27.86■■■□□ 2.05
RPA1-202ENST00000570451 PLEKHF1Q96S99 279 aa27.86■■■□□ 2.05
RPA1-202ENST00000570451 KIF3CO14782 793 aa27.85■■■□□ 2.05
RPA1-202ENST00000570451 NFE2L2Q16236 605 aa27.85■■■□□ 2.05
RPA1-202ENST00000570451 PRR5LQ6MZQ0 368 aa27.85■■■□□ 2.05
RPA1-202ENST00000570451 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
RPA1-202ENST00000570451 DLG5Q8TDM6 1919 aa27.84■■■□□ 2.05
RPA1-202ENST00000570451 DLEC1Q9Y238 1755 aa27.83■■■□□ 2.05
RPA1-202ENST00000570451 RASSF7Q02833 373 aa27.83■■■□□ 2.05
RPA1-202ENST00000570451 DDX10Q13206 875 aaKnown RBP27.83■■■□□ 2.05
RPA1-202ENST00000570451 RALBP1Q15311 655 aa27.83■■■□□ 2.05
RPA1-202ENST00000570451 CNBD1Q8NA66 436 aa27.83■■■□□ 2.05
RPA1-202ENST00000570451 BCORQ6W2J9 1755 aa27.82■■■□□ 2.04
RPA1-202ENST00000570451 PDE6BP35913 854 aa27.82■■■□□ 2.04
RPA1-202ENST00000570451 ZNF622Q969S3 477 aaKnown RBP eCLIP27.82■■■□□ 2.044e-10■□□□□ 8.7
RPA1-202ENST00000570451 THUMPD2Q9BTF0 503 aaKnown RBP27.82■■■□□ 2.04
RPA1-202ENST00000570451 BRIP1Q9BX63 1249 aa27.82■■■□□ 2.04
RPA1-202ENST00000570451 PNISRQ8TF01 805 aaKnown RBP27.81■■■□□ 2.04
RPA1-202ENST00000570451 NMRK2Q9NPI5 230 aa27.81■■■□□ 2.04
RPA1-202ENST00000570451 NBPF26B4DH59 902 aa27.8■■■□□ 2.04
RPA1-202ENST00000570451 NBPF10Q6P3W6 841 aaKnown RBP27.8■■■□□ 2.04
RPA1-202ENST00000570451 NBPF15Q8N660 670 aa27.8■■■□□ 2.04
RPA1-202ENST00000570451 ZNF652Q9Y2D9 606 aa27.8■■■□□ 2.04
RPA1-202ENST00000570451 ANKRD31Q8N7Z5 1873 aa27.8■■■□□ 2.04
RPA1-202ENST00000570451 ST5P78524 1137 aa27.79■■■□□ 2.04
RPA1-202ENST00000570451 ZNF219Q9P2Y4 722 aaPredicted RBP27.79■■■□□ 2.04
RPA1-202ENST00000570451 PDZRN3Q9UPQ7 1066 aa27.78■■■□□ 2.04
RPA1-202ENST00000570451 HSPA6P17066 643 aa27.77■■■□□ 2.04
RPA1-202ENST00000570451 CLEC4GQ6UXB4 293 aa27.77■■■□□ 2.04
RPA1-202ENST00000570451 NBPF5PQ86XG9 351 aaPredicted RBP27.77■■■□□ 2.04
RPA1-202ENST00000570451 SBF1O95248 1867 aa27.76■■■□□ 2.03
RPA1-202ENST00000570451 KDM3BQ7LBC6 1761 aa27.76■■■□□ 2.03
RPA1-202ENST00000570451 COL11A2P13942 1736 aaPredicted RBP27.75■■■□□ 2.03
RPA1-202ENST00000570451 KDM2BQ8NHM5 1336 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms