RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
MMP2-208ENST00000570308 FCHSD2O94868 740 aa12.52□□□□□ -0.41
MMP2-208ENST00000570308 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.41
MMP2-208ENST00000570308 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
MMP2-208ENST00000570308 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
MMP2-208ENST00000570308 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 CDC45O75419 566 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
MMP2-208ENST00000570308 KCNF1Q9H3M0 494 aa12.51□□□□□ -0.41
MMP2-208ENST00000570308 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 REC8O95072 547 aa12.5□□□□□ -0.41
MMP2-208ENST00000570308 KIF24Q5T7B8 1368 aa12.5□□□□□ -0.41
MMP2-208ENST00000570308 TNNT1P13805 278 aa12.5□□□□□ -0.41
MMP2-208ENST00000570308 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
MMP2-208ENST00000570308 NAA30Q147X3 362 aaPredicted RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 CEBPAP49715 358 aaPredicted RBP12.5□□□□□ -0.41
MMP2-208ENST00000570308 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 TEX35Q5T0J7 233 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 ICE2Q659A1 982 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
MMP2-208ENST00000570308 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
MMP2-208ENST00000570308 TMX1Q9H3N1 280 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
MMP2-208ENST00000570308 CCDC183Q5T5S1 534 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 CNPY4Q8N129 248 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 SLC26A8Q96RN1 970 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 AMOTL2Q9Y2J4 779 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 IL13P35225 146 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
MMP2-208ENST00000570308 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
MMP2-208ENST00000570308 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 TXLNBQ8N3L3 684 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
MMP2-208ENST00000570308 CASQ1P31415 396 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
MMP2-208ENST00000570308 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
MMP2-208ENST00000570308 KIF1BPQ96EK5 621 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
MMP2-208ENST00000570308 KCNG1Q9UIX4 513 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
MMP2-208ENST00000570308 TRIM27P14373 513 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
MMP2-208ENST00000570308 MST1RQ04912 1400 aa12.46□□□□□ -0.42
MMP2-208ENST00000570308 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.42
MMP2-208ENST00000570308 MUM1L1Q5H9M0 696 aa12.46□□□□□ -0.42
MMP2-208ENST00000570308 COG3Q96JB2 828 aa12.46□□□□□ -0.42
MMP2-208ENST00000570308 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.42
MMP2-208ENST00000570308 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
MMP2-208ENST00000570308 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 CWC15Q9P013 229 aaKnown RBP12.45□□□□□ -0.42
MMP2-208ENST00000570308 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
MMP2-208ENST00000570308 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 ACEP12821 1306 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 TPD52L1Q16890 204 aaPredicted RBP12.45□□□□□ -0.42
MMP2-208ENST00000570308 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 FBXO38Q6PIJ6 1188 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 SYT10Q6XYQ8 523 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
MMP2-208ENST00000570308 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
MMP2-208ENST00000570308 BRD1O95696 1058 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 KIF1AQ12756 1690 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 MYO1CO00159 1063 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 GADD45BO75293 160 aaPredicted RBP12.44□□□□□ -0.42
MMP2-208ENST00000570308 MX1P20591 662 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 PTGS1P23219 599 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 NME9Q86XW9 330 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
MMP2-208ENST00000570308 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 GPS2Q13227 327 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
MMP2-208ENST00000570308 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.43□□□□□ -0.42
MMP2-208ENST00000570308 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
MMP2-208ENST00000570308 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
MMP2-208ENST00000570308 TPM4P67936 248 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms