RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 VSIG10Q8N0Z9 540 aa28.44■■■□□ 2.14
PKD1-240ENST00000570253 RNF181Q9P0P0 153 aa28.44■■■□□ 2.14
PKD1-240ENST00000570253 NARFQ9UHQ1 456 aa28.44■■■□□ 2.14
PKD1-240ENST00000570253 CHRNA5P30532 468 aa28.43■■■□□ 2.14
PKD1-240ENST00000570253 MTHFSDQ2M296 383 aaKnown RBP28.43■■■□□ 2.14
PKD1-240ENST00000570253 CC2D1BQ5T0F9 858 aaKnown RBP28.43■■■□□ 2.14
PKD1-240ENST00000570253 NMRK2Q9NPI5 230 aa28.43■■■□□ 2.14
PKD1-240ENST00000570253 STARD3NLO95772 234 aa28.41■■■□□ 2.14
PKD1-240ENST00000570253 ADAMTS7Q9UKP4 1686 aa28.41■■■□□ 2.14
PKD1-240ENST00000570253 KCPQ6ZWJ8 1503 aa28.4■■■□□ 2.14
PKD1-240ENST00000570253 RBM46Q8TBY0 533 aaKnown RBP28.4■■■□□ 2.14
PKD1-240ENST00000570253 ZBTB1Q9Y2K1 713 aa28.4■■■□□ 2.14
PKD1-240ENST00000570253 TEFQ10587 303 aa28.39■■■□□ 2.14
PKD1-240ENST00000570253 A0A087WZG4 1122 aa28.38■■■□□ 2.13
PKD1-240ENST00000570253 NFIXQ14938 502 aa28.38■■■□□ 2.13
PKD1-240ENST00000570253 GAS2L2Q8NHY3 880 aa28.38■■■□□ 2.13
PKD1-240ENST00000570253 U2SURPO15042 1029 aaKnown RBP28.37■■■□□ 2.13
PKD1-240ENST00000570253 SERPINB2P05120 415 aa28.37■■■□□ 2.13
PKD1-240ENST00000570253 CANXP27824 592 aaKnown RBP28.37■■■□□ 2.13
PKD1-240ENST00000570253 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
PKD1-240ENST00000570253 AFDNP55196 1824 aaKnown RBP28.35■■■□□ 2.13
PKD1-240ENST00000570253 PER1O15534 1290 aaPredicted RBP28.35■■■□□ 2.13
PKD1-240ENST00000570253 TEX13AQ9BXU3 409 aaPredicted RBP28.35■■■□□ 2.13
PKD1-240ENST00000570253 GNAT3A8MTJ3 354 aa28.34■■■□□ 2.13
PKD1-240ENST00000570253 FSTL1Q12841 308 aa28.34■■■□□ 2.13
PKD1-240ENST00000570253 ZC3H4Q9UPT8 1303 aaKnown RBP28.34■■■□□ 2.13
PKD1-240ENST00000570253 UBR2Q8IWV8 1755 aa28.34■■■□□ 2.13
PKD1-240ENST00000570253 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
PKD1-240ENST00000570253 H0YIN7 160 aa28.32■■■□□ 2.12
PKD1-240ENST00000570253 CNGB1Q14028 1251 aaPredicted RBP28.32■■■□□ 2.12
PKD1-240ENST00000570253 TTLL6Q8N841 843 aa28.32■■■□□ 2.12
PKD1-240ENST00000570253 NPC1L1Q9UHC9 1359 aa28.32■■■□□ 2.12
PKD1-240ENST00000570253 NRXN2Q9P2S2 1712 aa28.32■■■□□ 2.12
PKD1-240ENST00000570253 SBF1O95248 1867 aa28.3■■■□□ 2.12
PKD1-240ENST00000570253 BICDL1Q6ZP65 573 aa28.3■■■□□ 2.12
PKD1-240ENST00000570253 C2CD5Q86YS7 1000 aa28.3■■■□□ 2.12
PKD1-240ENST00000570253 RRAGCQ9HB90 399 aa28.3■■■□□ 2.12
PKD1-240ENST00000570253 PDZRN3Q9UPQ7 1066 aa28.3■■■□□ 2.12
PKD1-240ENST00000570253 ZNF330Q9Y3S2 320 aaPredicted RBP28.3■■■□□ 2.12
PKD1-240ENST00000570253 LMNB1P20700 586 aa28.29■■■□□ 2.12
PKD1-240ENST00000570253 ZNF790Q6PG37 636 aa28.29■■■□□ 2.12
PKD1-240ENST00000570253 CFAP53Q96M91 514 aa28.29■■■□□ 2.12
PKD1-240ENST00000570253 DLEC1Q9Y238 1755 aa28.29■■■□□ 2.12
PKD1-240ENST00000570253 HEG1Q9ULI3 1381 aa28.28■■■□□ 2.12
PKD1-240ENST00000570253 EIF5P55010 431 aaKnown RBP28.28■■■□□ 2.12
PKD1-240ENST00000570253 BCL2L12Q9HB09 334 aa28.28■■■□□ 2.12
PKD1-240ENST00000570253 WDR90Q96KV7 1748 aa28.28■■■□□ 2.12
PKD1-240ENST00000570253 NPHP1O15259 732 aa28.27■■■□□ 2.12
PKD1-240ENST00000570253 RASSF7Q02833 373 aa28.27■■■□□ 2.12
PKD1-240ENST00000570253 FMNL2Q96PY5 1086 aa28.27■■■□□ 2.12
PKD1-240ENST00000570253 ZNF496Q96IT1 587 aaPredicted RBP28.26■■■□□ 2.11
PKD1-240ENST00000570253 PDE6BP35913 854 aa28.25■■■□□ 2.11
PKD1-240ENST00000570253 SMC1BQ8NDV3 1235 aa28.25■■■□□ 2.11
PKD1-240ENST00000570253 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
PKD1-240ENST00000570253 IL6STP40189 918 aaPredicted RBP28.24■■■□□ 2.11
PKD1-240ENST00000570253 NUDCQ9Y266 331 aa28.24■■■□□ 2.11
PKD1-240ENST00000570253 DNAJC5GQ8N7S2 189 aa28.23■■■□□ 2.11
PKD1-240ENST00000570253 IL17REQ8NFR9 667 aa28.23■■■□□ 2.11
PKD1-240ENST00000570253 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
PKD1-240ENST00000570253 ZNF622Q969S3 477 aaKnown RBP eCLIP28.22■■■□□ 2.11
PKD1-240ENST00000570253 SCN7AQ01118 1682 aa28.22■■■□□ 2.11
PKD1-240ENST00000570253 TBC1D9BQ66K14 1250 aa28.21■■■□□ 2.11
PKD1-240ENST00000570253 BRIP1Q9BX63 1249 aa28.21■■■□□ 2.11
PKD1-240ENST00000570253 TBC1D2BQ9UPU7 963 aa28.21■■■□□ 2.11
PKD1-240ENST00000570253 SIPA1L3O60292 1781 aaPredicted RBP28.2■■■□□ 2.11
PKD1-240ENST00000570253 GLTPD2A6NH11 291 aa28.2■■■□□ 2.1
PKD1-240ENST00000570253 BTBD11A6QL63 1104 aa28.2■■■□□ 2.1
PKD1-240ENST00000570253 VEGFAP15692 232 aaPredicted RBP28.2■■■□□ 2.1
PKD1-240ENST00000570253 DPY19L2Q6NUT2 758 aa28.19■■■□□ 2.1
PKD1-240ENST00000570253 KLRG1Q96E93 195 aa28.19■■■□□ 2.1
PKD1-240ENST00000570253 SETDB2Q96T68 719 aa28.19■■■□□ 2.1
PKD1-240ENST00000570253 PRKAR2BP31323 418 aa28.18■■■□□ 2.1
PKD1-240ENST00000570253 ST5P78524 1137 aa28.18■■■□□ 2.1
PKD1-240ENST00000570253 RTF1Q92541 710 aaKnown RBP28.18■■■□□ 2.1
PKD1-240ENST00000570253 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
PKD1-240ENST00000570253 CNBD1Q8NA66 436 aa28.17■■■□□ 2.1
PKD1-240ENST00000570253 CEMIPQ8WUJ3 1361 aa28.16■■■□□ 2.1
PKD1-240ENST00000570253 CCDC88AQ3V6T2 1871 aa28.16■■■□□ 2.1
PKD1-240ENST00000570253 PRR5LQ6MZQ0 368 aa28.15■■■□□ 2.1
PKD1-240ENST00000570253 DZIP3Q86Y13 1208 aaKnown RBP28.14■■■□□ 2.1
PKD1-240ENST00000570253 NFKBIEO00221 500 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 C21orf2O43822 256 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 A1BGP04217 495 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 CNKSR1Q969H4 720 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 RSPH6AQ9H0K4 717 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 ZNF219Q9P2Y4 722 aaPredicted RBP28.13■■■□□ 2.09
PKD1-240ENST00000570253 ZNF652Q9Y2D9 606 aa28.13■■■□□ 2.09
PKD1-240ENST00000570253 ANKRD31Q8N7Z5 1873 aa28.12■■■□□ 2.09
PKD1-240ENST00000570253 U2AF1L5P0DN76 240 aaPredicted RBP28.12■■■□□ 2.09
PKD1-240ENST00000570253 HTRA3P83110 453 aa28.12■■■□□ 2.09
PKD1-240ENST00000570253 U2AF1Q01081 240 aaKnown RBP eCLIP28.12■■■□□ 2.09
PKD1-240ENST00000570253 SOGA3Q5TF21 947 aa28.12■■■□□ 2.09
PKD1-240ENST00000570253 PHACTR3Q96KR7 559 aa28.11■■■□□ 2.09
PKD1-240ENST00000570253 CAMTA2O94983 1202 aa28.1■■■□□ 2.09
PKD1-240ENST00000570253 ERFEQ4G0M1 354 aa28.1■■■□□ 2.09
PKD1-240ENST00000570253 CCDC24Q8N4L8 307 aa28.1■■■□□ 2.09
PKD1-240ENST00000570253 STYK1Q6J9G0 422 aa28.09■■■□□ 2.09
PKD1-240ENST00000570253 JMYQ8N9B5 988 aa28.09■■■□□ 2.09
PKD1-240ENST00000570253 TAOK3Q9H2K8 898 aa28.09■■■□□ 2.09
PKD1-240ENST00000570253 NEFMP07197 916 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms