RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
LINC00555-201ENST00000569288 CABP4P57796 275 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 ZNF831Q5JPB2 1677 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 RREB1Q92766 1687 aa12.05□□□□□ -0.48
LINC00555-201ENST00000569288 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
LINC00555-201ENST00000569288 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
LINC00555-201ENST00000569288 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
LINC00555-201ENST00000569288 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
LINC00555-201ENST00000569288 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
LINC00555-201ENST00000569288 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
LINC00555-201ENST00000569288 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
LINC00555-201ENST00000569288 ELL2O00472 640 aaPredicted RBP12.03□□□□□ -0.48
LINC00555-201ENST00000569288 TRIM37O94972 964 aa12.03□□□□□ -0.48
LINC00555-201ENST00000569288 RLBP1P12271 317 aa12.03□□□□□ -0.48
LINC00555-201ENST00000569288 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
LINC00555-201ENST00000569288 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
LINC00555-201ENST00000569288 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
LINC00555-201ENST00000569288 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
LINC00555-201ENST00000569288 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
LINC00555-201ENST00000569288 BAG6P46379 1132 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 DDX21Q9NR30 783 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00555-201ENST00000569288 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.49
LINC00555-201ENST00000569288 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
LINC00555-201ENST00000569288 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
LINC00555-201ENST00000569288 UBR2Q8IWV8 1755 aa12.01□□□□□ -0.49
LINC00555-201ENST00000569288 FLIIQ13045 1269 aa12.01□□□□□ -0.49
LINC00555-201ENST00000569288 TMEM57Q8N5G2 664 aa12.01□□□□□ -0.49
LINC00555-201ENST00000569288 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
LINC00555-201ENST00000569288 KCNQ2O43526 872 aa12□□□□□ -0.49
LINC00555-201ENST00000569288 DDX58O95786 925 aaKnown RBP12□□□□□ -0.49
LINC00555-201ENST00000569288 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
LINC00555-201ENST00000569288 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
LINC00555-201ENST00000569288 PXDNLA1KZ92 1463 aa12□□□□□ -0.49
LINC00555-201ENST00000569288 APBA3O96018 575 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 TMOD3Q9NYL9 352 aa11.99□□□□□ -0.49
LINC00555-201ENST00000569288 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
LINC00555-201ENST00000569288 GNAI3P08754 354 aa11.98□□□□□ -0.49
LINC00555-201ENST00000569288 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
LINC00555-201ENST00000569288 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 ATP10DQ9P241 1426 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 KCNQ3O43525 872 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 PIGBQ92521 554 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
LINC00555-201ENST00000569288 GCC1Q96CN9 775 aa11.97□□□□□ -0.49
LINC00555-201ENST00000569288 ZNF496Q96IT1 587 aaPredicted RBP11.97□□□□□ -0.49
LINC00555-201ENST00000569288 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
LINC00555-201ENST00000569288 PDIA6Q15084 440 aa11.96□□□□□ -0.49
LINC00555-201ENST00000569288 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
LINC00555-201ENST00000569288 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
LINC00555-201ENST00000569288 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
LINC00555-201ENST00000569288 C5P01031 1676 aa11.96□□□□□ -0.5
LINC00555-201ENST00000569288 COL5A3P25940 1745 aaPredicted RBP11.95□□□□□ -0.5
LINC00555-201ENST00000569288 RGL2O15211 777 aa11.95□□□□□ -0.5
LINC00555-201ENST00000569288 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
LINC00555-201ENST00000569288 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
LINC00555-201ENST00000569288 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
LINC00555-201ENST00000569288 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
LINC00555-201ENST00000569288 STARD3NLO95772 234 aa11.94□□□□□ -0.5
LINC00555-201ENST00000569288 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
LINC00555-201ENST00000569288 G2E3Q7L622 706 aa11.94□□□□□ -0.5
LINC00555-201ENST00000569288 PROM2Q8N271 834 aa11.94□□□□□ -0.5
LINC00555-201ENST00000569288 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
LINC00555-201ENST00000569288 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 HMMRO75330 724 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
LINC00555-201ENST00000569288 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 SRCIN1Q9C0H9 1055 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
LINC00555-201ENST00000569288 UTYO14607 1347 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 TJP1Q07157 1748 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 GNAI2P04899 355 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
LINC00555-201ENST00000569288 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 USP16Q9Y5T5 823 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 MYH14Q7Z406 1995 aaKnown RBP11.92□□□□□ -0.5
LINC00555-201ENST00000569288 COL15A1P39059 1388 aa11.92□□□□□ -0.5
LINC00555-201ENST00000569288 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
LINC00555-201ENST00000569288 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
LINC00555-201ENST00000569288 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
LINC00555-201ENST00000569288 IGHDP01880 384 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms