RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 KCNA3P22001 575 aa20.78■□□□□ 0.92
SCAMP2-210ENST00000569124 DDR1Q08345 913 aa20.78■□□□□ 0.92
SCAMP2-210ENST00000569124 C9orf131Q5VYM1 1079 aa20.78■□□□□ 0.92
SCAMP2-210ENST00000569124 SCN7AQ01118 1682 aa20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 IL13P35225 146 aa20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 DALRD3Q5D0E6 543 aaKnown RBP20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 AKAP4Q5JQC9 854 aa20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 C16orf71Q8IYS4 520 aaPredicted RBP20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
SCAMP2-210ENST00000569124 ZPR1O75312 459 aa20.76■□□□□ 0.91
SCAMP2-210ENST00000569124 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
SCAMP2-210ENST00000569124 SLC52A2Q9HAB3 445 aa20.75■□□□□ 0.91
SCAMP2-210ENST00000569124 KDM2BQ8NHM5 1336 aa20.75■□□□□ 0.91
SCAMP2-210ENST00000569124 COL15A1P39059 1388 aa20.74■□□□□ 0.91
SCAMP2-210ENST00000569124 POLRMTO00411 1230 aaKnown RBP20.74■□□□□ 0.91
SCAMP2-210ENST00000569124 DNAJC10Q8IXB1 793 aa20.74■□□□□ 0.91
SCAMP2-210ENST00000569124 RNF181Q9P0P0 153 aa20.74■□□□□ 0.91
SCAMP2-210ENST00000569124 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
SCAMP2-210ENST00000569124 CHRNA5P30532 468 aa20.73■□□□□ 0.91
SCAMP2-210ENST00000569124 RALBP1Q15311 655 aa20.73■□□□□ 0.91
SCAMP2-210ENST00000569124 RBM46Q8TBY0 533 aaKnown RBP20.73■□□□□ 0.91
SCAMP2-210ENST00000569124 USPL1Q5W0Q7 1092 aa20.72■□□□□ 0.91
SCAMP2-210ENST00000569124 COL11A2P13942 1736 aaPredicted RBP20.72■□□□□ 0.91
SCAMP2-210ENST00000569124 FER1L6Q2WGJ9 1857 aa20.71■□□□□ 0.91
SCAMP2-210ENST00000569124 BCORQ6W2J9 1755 aa20.71■□□□□ 0.91
SCAMP2-210ENST00000569124 ARFGEF2Q9Y6D5 1785 aa20.71■□□□□ 0.91
SCAMP2-210ENST00000569124 RNMTO43148 476 aaKnown RBP20.7■□□□□ 0.9
SCAMP2-210ENST00000569124 HMOX1P09601 288 aa20.7■□□□□ 0.9
SCAMP2-210ENST00000569124 TM4SF1P30408 202 aa20.7■□□□□ 0.9
SCAMP2-210ENST00000569124 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
SCAMP2-210ENST00000569124 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
SCAMP2-210ENST00000569124 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
SCAMP2-210ENST00000569124 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
SCAMP2-210ENST00000569124 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
SCAMP2-210ENST00000569124 ZBTB1Q9Y2K1 713 aa20.68■□□□□ 0.9
SCAMP2-210ENST00000569124 FSTL1Q12841 308 aa20.67■□□□□ 0.9
SCAMP2-210ENST00000569124 NFIXQ14938 502 aa20.67■□□□□ 0.9
SCAMP2-210ENST00000569124 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
SCAMP2-210ENST00000569124 DNAJC5GQ8N7S2 189 aa20.66■□□□□ 0.9
SCAMP2-210ENST00000569124 RASSF7Q02833 373 aa20.65■□□□□ 0.9
SCAMP2-210ENST00000569124 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
SCAMP2-210ENST00000569124 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.89
SCAMP2-210ENST00000569124 DIAPH1O60610 1272 aaKnown RBP20.64■□□□□ 0.89
SCAMP2-210ENST00000569124 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
SCAMP2-210ENST00000569124 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
SCAMP2-210ENST00000569124 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
SCAMP2-210ENST00000569124 SERPINB2P05120 415 aa20.63■□□□□ 0.89
SCAMP2-210ENST00000569124 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
SCAMP2-210ENST00000569124 CARMIL3Q8ND23 1372 aa20.62■□□□□ 0.89
SCAMP2-210ENST00000569124 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
SCAMP2-210ENST00000569124 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
SCAMP2-210ENST00000569124 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
SCAMP2-210ENST00000569124 KLRG1Q96E93 195 aa20.61■□□□□ 0.89
SCAMP2-210ENST00000569124 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 LMNB1P20700 586 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 HTRA3P83110 453 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 C2CD5Q86YS7 1000 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
SCAMP2-210ENST00000569124 A0A087WZG4 1122 aa20.59■□□□□ 0.89
SCAMP2-210ENST00000569124 H0YIN7 160 aa20.59■□□□□ 0.89
SCAMP2-210ENST00000569124 STARD3NLO95772 234 aa20.59■□□□□ 0.89
SCAMP2-210ENST00000569124 TEFQ10587 303 aa20.58■□□□□ 0.89
SCAMP2-210ENST00000569124 BICDL1Q6ZP65 573 aa20.58■□□□□ 0.89
SCAMP2-210ENST00000569124 HEG1Q9ULI3 1381 aa20.58■□□□□ 0.88
SCAMP2-210ENST00000569124 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 EIF5P55010 431 aaKnown RBP20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 JMYQ8N9B5 988 aa20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 ZNF330Q9Y3S2 320 aaPredicted RBP20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 LAMB4A4D0S4 1761 aa20.56■□□□□ 0.88
SCAMP2-210ENST00000569124 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
SCAMP2-210ENST00000569124 VEGFAP15692 232 aaPredicted RBP20.55■□□□□ 0.88
SCAMP2-210ENST00000569124 MIER1Q8N108 512 aa20.55■□□□□ 0.88
SCAMP2-210ENST00000569124 SCN4AP35499 1836 aa20.55■□□□□ 0.88
SCAMP2-210ENST00000569124 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
SCAMP2-210ENST00000569124 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 TBC1D9BQ66K14 1250 aa20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 TEX13AQ9BXU3 409 aaPredicted RBP20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
SCAMP2-210ENST00000569124 NFKBIEO00221 500 aa20.53■□□□□ 0.88
SCAMP2-210ENST00000569124 PRELPP51888 382 aa20.53■□□□□ 0.88
SCAMP2-210ENST00000569124 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
SCAMP2-210ENST00000569124 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCAMP2-210ENST00000569124 PDE6BP35913 854 aa20.52■□□□□ 0.88
SCAMP2-210ENST00000569124 PCNTO95613 3336 aa20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 NPHP1O15259 732 aa20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 BRIP1Q9BX63 1249 aa20.51■□□□□ 0.87
SCAMP2-210ENST00000569124 PRR5LQ6MZQ0 368 aa20.5■□□□□ 0.87
SCAMP2-210ENST00000569124 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
SCAMP2-210ENST00000569124 TBC1D2BQ9UPU7 963 aa20.5■□□□□ 0.87
SCAMP2-210ENST00000569124 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
SCAMP2-210ENST00000569124 NUP98P52948 1817 aa20.49■□□□□ 0.87
SCAMP2-210ENST00000569124 DPY19L2Q6NUT2 758 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms