RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
TMX3-210ENST00000569053 POLRMTO00411 1230 aaKnown RBP14.88□□□□□ -0.03
TMX3-210ENST00000569053 TM4SF1P30408 202 aa14.88□□□□□ -0.03
TMX3-210ENST00000569053 C1orf141Q5JVX7 400 aa14.88□□□□□ -0.03
TMX3-210ENST00000569053 SBF1O95248 1867 aa14.88□□□□□ -0.03
TMX3-210ENST00000569053 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
TMX3-210ENST00000569053 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
TMX3-210ENST00000569053 PRELPP51888 382 aa14.87□□□□□ -0.03
TMX3-210ENST00000569053 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
TMX3-210ENST00000569053 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
TMX3-210ENST00000569053 HMOX1P09601 288 aa14.86□□□□□ -0.03
TMX3-210ENST00000569053 CYP19A1P11511 503 aaPredicted RBP14.86□□□□□ -0.03
TMX3-210ENST00000569053 C9orf131Q5VYM1 1079 aa14.86□□□□□ -0.03
TMX3-210ENST00000569053 USPL1Q5W0Q7 1092 aa14.86□□□□□ -0.03
TMX3-210ENST00000569053 SLC52A2Q9HAB3 445 aa14.86□□□□□ -0.03
TMX3-210ENST00000569053 MRC1P22897 1456 aa14.86□□□□□ -0.03
TMX3-210ENST00000569053 PER1O15534 1290 aaPredicted RBP14.85□□□□□ -0.03
TMX3-210ENST00000569053 RNMTO43148 476 aaKnown RBP14.85□□□□□ -0.03
TMX3-210ENST00000569053 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
TMX3-210ENST00000569053 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
TMX3-210ENST00000569053 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
TMX3-210ENST00000569053 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
TMX3-210ENST00000569053 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
TMX3-210ENST00000569053 HTRA3P83110 453 aa14.84□□□□□ -0.03
TMX3-210ENST00000569053 PIM2Q9P1W9 311 aa14.84□□□□□ -0.03
TMX3-210ENST00000569053 KNSTRNQ9Y448 316 aa14.84□□□□□ -0.03
TMX3-210ENST00000569053 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
TMX3-210ENST00000569053 TOMM70O94826 608 aa14.83□□□□□ -0.04
TMX3-210ENST00000569053 NFIXQ14938 502 aa14.83□□□□□ -0.04
TMX3-210ENST00000569053 ZBTB1Q9Y2K1 713 aa14.83□□□□□ -0.04
TMX3-210ENST00000569053 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.04
TMX3-210ENST00000569053 RASSF7Q02833 373 aa14.81□□□□□ -0.04
TMX3-210ENST00000569053 DALRD3Q5D0E6 543 aaKnown RBP14.81□□□□□ -0.04
TMX3-210ENST00000569053 CARMIL3Q8ND23 1372 aa14.81□□□□□ -0.04
TMX3-210ENST00000569053 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
TMX3-210ENST00000569053 RNF181Q9P0P0 153 aa14.8□□□□□ -0.04
TMX3-210ENST00000569053 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
TMX3-210ENST00000569053 WDR90Q96KV7 1748 aa14.8□□□□□ -0.04
TMX3-210ENST00000569053 DLEC1Q9Y238 1755 aa14.8□□□□□ -0.04
TMX3-210ENST00000569053 COL15A1P39059 1388 aa14.79□□□□□ -0.04
TMX3-210ENST00000569053 APLP1P51693 650 aa14.79□□□□□ -0.04
TMX3-210ENST00000569053 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
TMX3-210ENST00000569053 RRAGCQ9HB90 399 aa14.79□□□□□ -0.04
TMX3-210ENST00000569053 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
TMX3-210ENST00000569053 ANKRD31Q8N7Z5 1873 aa14.78□□□□□ -0.04
TMX3-210ENST00000569053 IL17REQ8NFR9 667 aa14.78□□□□□ -0.04
TMX3-210ENST00000569053 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
TMX3-210ENST00000569053 ZPR1O75312 459 aa14.77□□□□□ -0.05
TMX3-210ENST00000569053 SERPINB2P05120 415 aa14.77□□□□□ -0.05
TMX3-210ENST00000569053 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
TMX3-210ENST00000569053 RBM46Q8TBY0 533 aaKnown RBP14.77□□□□□ -0.05
TMX3-210ENST00000569053 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
TMX3-210ENST00000569053 DIAPH1O60610 1272 aaKnown RBP14.76□□□□□ -0.05
TMX3-210ENST00000569053 EIF5P55010 431 aaKnown RBP14.76□□□□□ -0.05
TMX3-210ENST00000569053 CCDC24Q8N4L8 307 aa14.76□□□□□ -0.05
TMX3-210ENST00000569053 KCNQ3O43525 872 aa14.75□□□□□ -0.05
TMX3-210ENST00000569053 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
TMX3-210ENST00000569053 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
TMX3-210ENST00000569053 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
TMX3-210ENST00000569053 NFKBIEO00221 500 aa14.74□□□□□ -0.05
TMX3-210ENST00000569053 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
TMX3-210ENST00000569053 TBC1D9BQ66K14 1250 aa14.74□□□□□ -0.05
TMX3-210ENST00000569053 BICDL1Q6ZP65 573 aa14.74□□□□□ -0.05
TMX3-210ENST00000569053 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
TMX3-210ENST00000569053 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
TMX3-210ENST00000569053 POTECB2RU33 542 aa14.73□□□□□ -0.05
TMX3-210ENST00000569053 A1BGP04217 495 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 C2CD5Q86YS7 1000 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
TMX3-210ENST00000569053 PHACTR3Q96KR7 559 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 TBC1D2BQ9UPU7 963 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 HEG1Q9ULI3 1381 aa14.72□□□□□ -0.05
TMX3-210ENST00000569053 SCN7AQ01118 1682 aa14.71□□□□□ -0.05
TMX3-210ENST00000569053 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
TMX3-210ENST00000569053 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
TMX3-210ENST00000569053 KLRG1Q96E93 195 aa14.71□□□□□ -0.05
TMX3-210ENST00000569053 PCNTO95613 3336 aa14.71□□□□□ -0.06
TMX3-210ENST00000569053 KDM2BQ8NHM5 1336 aa14.7□□□□□ -0.06
TMX3-210ENST00000569053 PIP4K2AP48426 406 aaPredicted RBP14.7□□□□□ -0.06
TMX3-210ENST00000569053 FSTL1Q12841 308 aa14.7□□□□□ -0.06
TMX3-210ENST00000569053 PRR5LQ6MZQ0 368 aa14.7□□□□□ -0.06
TMX3-210ENST00000569053 TTLL6Q8N841 843 aa14.7□□□□□ -0.06
TMX3-210ENST00000569053 JMYQ8N9B5 988 aa14.7□□□□□ -0.06
TMX3-210ENST00000569053 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
TMX3-210ENST00000569053 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
TMX3-210ENST00000569053 U2SURPO15042 1029 aaKnown RBP14.69□□□□□ -0.06
TMX3-210ENST00000569053 LMNB1P20700 586 aa14.69□□□□□ -0.06
TMX3-210ENST00000569053 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
TMX3-210ENST00000569053 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
TMX3-210ENST00000569053 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 GNAT3A8MTJ3 354 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 CAMTA2O94983 1202 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 COL13A1Q5TAT6 717 aaPredicted RBP14.68□□□□□ -0.06
TMX3-210ENST00000569053 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 NPC1L1Q9UHC9 1359 aa14.68□□□□□ -0.06
TMX3-210ENST00000569053 DICER1Q9UPY3 1922 aaKnown RBP14.67□□□□□ -0.06
TMX3-210ENST00000569053 H0YIN7 160 aa14.67□□□□□ -0.06
TMX3-210ENST00000569053 C21orf2O43822 256 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms