RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 GNAI1P63096 354 aa20.69■□□□□ 0.9
CDH16-208ENST00000568698 HDAC1Q13547 482 aaPredicted RBP20.69■□□□□ 0.9
CDH16-208ENST00000568698 BECN1Q14457 450 aa20.69■□□□□ 0.9
CDH16-208ENST00000568698 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
CDH16-208ENST00000568698 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
CDH16-208ENST00000568698 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 IPO8O15397 1037 aaKnown RBP20.68■□□□□ 0.9
CDH16-208ENST00000568698 SLC4A3P48751 1232 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 ALDH1L2Q3SY69 923 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 UBR2Q8IWV8 1755 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 KCNQ3O43525 872 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 SLC39A6Q13433 755 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 SSH1Q8WYL5 1049 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
CDH16-208ENST00000568698 TRIM27P14373 513 aa20.67■□□□□ 0.9
CDH16-208ENST00000568698 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
CDH16-208ENST00000568698 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
CDH16-208ENST00000568698 TRIM37O94972 964 aa20.66■□□□□ 0.9
CDH16-208ENST00000568698 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
CDH16-208ENST00000568698 BCL11BQ9C0K0 894 aaPredicted RBP20.66■□□□□ 0.9
CDH16-208ENST00000568698 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
CDH16-208ENST00000568698 BRPF1P55201 1214 aaPredicted RBP20.65■□□□□ 0.9
CDH16-208ENST00000568698 TNS1Q9HBL0 1735 aaKnown RBP20.65■□□□□ 0.9
CDH16-208ENST00000568698 KCPQ6ZWJ8 1503 aa20.65■□□□□ 0.9
CDH16-208ENST00000568698 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
CDH16-208ENST00000568698 SEC24BO95487 1268 aa20.62■□□□□ 0.89
CDH16-208ENST00000568698 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
CDH16-208ENST00000568698 ITPRIPQ8IWB1 547 aa20.62■□□□□ 0.89
CDH16-208ENST00000568698 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
CDH16-208ENST00000568698 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
CDH16-208ENST00000568698 TBC1D32Q96NH3 1257 aa20.61■□□□□ 0.89
CDH16-208ENST00000568698 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
CDH16-208ENST00000568698 CHMP4BQ9H444 224 aaKnown RBP20.61■□□□□ 0.89
CDH16-208ENST00000568698 LY75O60449 1722 aa20.6■□□□□ 0.89
CDH16-208ENST00000568698 PALLDQ8WX93 1383 aa20.59■□□□□ 0.89
CDH16-208ENST00000568698 GSE1Q14687 1217 aa20.59■□□□□ 0.89
CDH16-208ENST00000568698 SMC5Q8IY18 1101 aa20.59■□□□□ 0.89
CDH16-208ENST00000568698 TTC5Q8N0Z6 440 aa20.59■□□□□ 0.89
CDH16-208ENST00000568698 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
CDH16-208ENST00000568698 C5P01031 1676 aa20.58■□□□□ 0.89
CDH16-208ENST00000568698 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
CDH16-208ENST00000568698 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
CDH16-208ENST00000568698 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
CDH16-208ENST00000568698 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.88
CDH16-208ENST00000568698 TMEM57Q8N5G2 664 aa20.58■□□□□ 0.88
CDH16-208ENST00000568698 TSPYL6Q8N831 410 aa20.58■□□□□ 0.88
CDH16-208ENST00000568698 ARHGAP45Q92619 1136 aa20.57■□□□□ 0.88
CDH16-208ENST00000568698 SMARCC1Q92922 1105 aaPredicted RBP20.56■□□□□ 0.88
CDH16-208ENST00000568698 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
CDH16-208ENST00000568698 ZNF831Q5JPB2 1677 aa20.56■□□□□ 0.88
CDH16-208ENST00000568698 PRAMEF22A3QJZ6 481 aa20.56■□□□□ 0.88
CDH16-208ENST00000568698 CICQ96RK0 1608 aaPredicted RBP20.56■□□□□ 0.88
CDH16-208ENST00000568698 TJP1Q07157 1748 aa20.56■□□□□ 0.88
CDH16-208ENST00000568698 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
CDH16-208ENST00000568698 ELL2O00472 640 aaPredicted RBP20.54■□□□□ 0.88
CDH16-208ENST00000568698 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
CDH16-208ENST00000568698 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
CDH16-208ENST00000568698 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 APBA3O96018 575 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 SIK1P57059 783 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 PLSCR1O15162 318 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
CDH16-208ENST00000568698 LAMB4A4D0S4 1761 aa20.52■□□□□ 0.88
CDH16-208ENST00000568698 VAMP4O75379 141 aa20.52■□□□□ 0.88
CDH16-208ENST00000568698 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
CDH16-208ENST00000568698 TAF1LQ8IZX4 1826 aa20.52■□□□□ 0.87
CDH16-208ENST00000568698 SNRPA1P09661 255 aaKnown RBP20.51■□□□□ 0.87
CDH16-208ENST00000568698 PROM2Q8N271 834 aa20.51■□□□□ 0.87
CDH16-208ENST00000568698 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
CDH16-208ENST00000568698 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
CDH16-208ENST00000568698 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
CDH16-208ENST00000568698 HOXB7P09629 217 aa20.5■□□□□ 0.87
CDH16-208ENST00000568698 KCNQ4P56696 695 aa20.5■□□□□ 0.87
CDH16-208ENST00000568698 NUCB1Q02818 461 aa20.5■□□□□ 0.87
CDH16-208ENST00000568698 ITPK1Q13572 414 aa20.5■□□□□ 0.87
CDH16-208ENST00000568698 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
CDH16-208ENST00000568698 MRPL50Q8N5N7 158 aaKnown RBP20.49■□□□□ 0.87
CDH16-208ENST00000568698 LRRC4BQ9NT99 713 aa20.49■□□□□ 0.87
CDH16-208ENST00000568698 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
CDH16-208ENST00000568698 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
CDH16-208ENST00000568698 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
CDH16-208ENST00000568698 CCNL1Q9UK58 526 aaPredicted RBP20.48■□□□□ 0.87
CDH16-208ENST00000568698 TXNRD1Q16881 649 aa20.47■□□□□ 0.87
CDH16-208ENST00000568698 UPF1Q92900 1129 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDH16-208ENST00000568698 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
CDH16-208ENST00000568698 CAMKK2Q96RR4 588 aa20.47■□□□□ 0.87
CDH16-208ENST00000568698 C22orf23Q9BZE7 217 aa20.47■□□□□ 0.87
CDH16-208ENST00000568698 CCDC125Q86Z20 511 aa20.46■□□□□ 0.87
CDH16-208ENST00000568698 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
CDH16-208ENST00000568698 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
CDH16-208ENST00000568698 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
CDH16-208ENST00000568698 DEFB132Q7Z7B7 95 aa20.46■□□□□ 0.87
CDH16-208ENST00000568698 TBC1D2Q9BYX2 928 aa20.46■□□□□ 0.87
CDH16-208ENST00000568698 ABCC4O15439 1325 aa20.45■□□□□ 0.86
CDH16-208ENST00000568698 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
CDH16-208ENST00000568698 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
CDH16-208ENST00000568698 RREB1Q92766 1687 aa20.45■□□□□ 0.86
CDH16-208ENST00000568698 ZBTB7BO15156 539 aaPredicted RBP20.44■□□□□ 0.86
CDH16-208ENST00000568698 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms