RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 FMN2Q9NZ56 1722 aa26■■□□□ 1.75
DENND4A-208ENST00000568515 CCDC183Q5T5S1 534 aa26■■□□□ 1.75
DENND4A-208ENST00000568515 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
DENND4A-208ENST00000568515 CACNA1FO60840 1977 aa25.98■■□□□ 1.75
DENND4A-208ENST00000568515 RAB11FIP3O75154 756 aa25.98■■□□□ 1.75
DENND4A-208ENST00000568515 RAD50Q92878 1312 aa25.98■■□□□ 1.75
DENND4A-208ENST00000568515 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
DENND4A-208ENST00000568515 MTERF4Q7Z6M4 381 aaKnown RBP25.98■■□□□ 1.75
DENND4A-208ENST00000568515 CNPY2Q9Y2B0 182 aa25.98■■□□□ 1.75
DENND4A-208ENST00000568515 SGSM2O43147 1006 aa25.97■■□□□ 1.75
DENND4A-208ENST00000568515 MAP4K4O95819 1239 aaPredicted RBP25.97■■□□□ 1.75
DENND4A-208ENST00000568515 SNX14Q9Y5W7 946 aa25.97■■□□□ 1.75
DENND4A-208ENST00000568515 GNAT3A8MTJ3 354 aa25.97■■□□□ 1.75
DENND4A-208ENST00000568515 ZSCAN22P10073 491 aaPredicted RBP25.97■■□□□ 1.75
DENND4A-208ENST00000568515 AMPHP49418 695 aa25.97■■□□□ 1.75
DENND4A-208ENST00000568515 TTC14Q96N46 770 aa25.97■■□□□ 1.75
DENND4A-208ENST00000568515 TTC21AQ8NDW8 1320 aa25.96■■□□□ 1.75
DENND4A-208ENST00000568515 PI4K2BQ8TCG2 481 aa25.96■■□□□ 1.75
DENND4A-208ENST00000568515 PXDNLA1KZ92 1463 aa25.96■■□□□ 1.75
DENND4A-208ENST00000568515 LETM1O95202 739 aaPredicted RBP25.96■■□□□ 1.75
DENND4A-208ENST00000568515 USP25Q9UHP3 1055 aa25.96■■□□□ 1.75
DENND4A-208ENST00000568515 SURF6O75683 361 aaKnown RBP25.95■■□□□ 1.75
DENND4A-208ENST00000568515 LRRC37A3O60309 1634 aa25.95■■□□□ 1.74
DENND4A-208ENST00000568515 PPP1R42Q7Z4L9 355 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 N4BP2Q86UW6 1770 aaPredicted RBP25.94■■□□□ 1.74
DENND4A-208ENST00000568515 AK2P54819 239 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 UBE2HP62256 183 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 RHPN1Q8TCX5 695 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 LSG1Q9H089 658 aaKnown RBP25.94■■□□□ 1.74
DENND4A-208ENST00000568515 LIMCH1Q9UPQ0 1083 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 ADAMTS13Q76LX8 1427 aa25.94■■□□□ 1.74
DENND4A-208ENST00000568515 STX6O43752 255 aa25.93■■□□□ 1.74
DENND4A-208ENST00000568515 POLA2Q14181 598 aa25.93■■□□□ 1.74
DENND4A-208ENST00000568515 TMEM2Q9UHN6 1383 aa25.93■■□□□ 1.74
DENND4A-208ENST00000568515 SYT1P21579 422 aa25.93■■□□□ 1.74
DENND4A-208ENST00000568515 MPNDQ8N594 471 aa25.93■■□□□ 1.74
DENND4A-208ENST00000568515 ESF1Q9H501 851 aaKnown RBP25.93■■□□□ 1.74
DENND4A-208ENST00000568515 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.93■■□□□ 1.74
DENND4A-208ENST00000568515 ADCY5O95622 1261 aa25.92■■□□□ 1.74
DENND4A-208ENST00000568515 RUFY3Q7L099 469 aa25.92■■□□□ 1.74
DENND4A-208ENST00000568515 RASEFQ8IZ41 740 aa25.92■■□□□ 1.74
DENND4A-208ENST00000568515 PIBF1Q8WXW3 757 aa25.92■■□□□ 1.74
DENND4A-208ENST00000568515 ZNF830Q96NB3 372 aaPredicted RBP25.92■■□□□ 1.74
DENND4A-208ENST00000568515 DNTTIP2Q5QJE6 756 aaKnown RBP25.92■■□□□ 1.74
DENND4A-208ENST00000568515 IL17REQ8NFR9 667 aa25.92■■□□□ 1.74
DENND4A-208ENST00000568515 HCLS1P14317 486 aaPredicted RBP25.91■■□□□ 1.74
DENND4A-208ENST00000568515 TAF7Q15545 349 aaPredicted RBP25.91■■□□□ 1.74
DENND4A-208ENST00000568515 CNTROBQ8N137 903 aa25.91■■□□□ 1.74
DENND4A-208ENST00000568515 MYRIPQ8NFW9 859 aa25.91■■□□□ 1.74
DENND4A-208ENST00000568515 LARP6Q9BRS8 491 aaKnown RBP25.91■■□□□ 1.74
DENND4A-208ENST00000568515 F13A1P00488 732 aa25.9■■□□□ 1.74
DENND4A-208ENST00000568515 KIF1BPQ96EK5 621 aa25.9■■□□□ 1.74
DENND4A-208ENST00000568515 BABAM1Q9NWV8 329 aa25.9■■□□□ 1.74
DENND4A-208ENST00000568515 SMC3Q9UQE7 1217 aa25.9■■□□□ 1.74
DENND4A-208ENST00000568515 NOLC1Q14978 699 aaKnown RBP eCLIP25.9■■□□□ 1.74
DENND4A-208ENST00000568515 TPRNQ4KMQ1 711 aa25.9■■□□□ 1.74
DENND4A-208ENST00000568515 PHAXQ9H814 394 aaKnown RBP25.9■■□□□ 1.74
DENND4A-208ENST00000568515 ATP6V1DQ9Y5K8 247 aa25.89■■□□□ 1.74
DENND4A-208ENST00000568515 TSPOAP1O95153 1857 aa25.89■■□□□ 1.74
DENND4A-208ENST00000568515 HDGFL1Q5TGJ6 251 aa25.89■■□□□ 1.73
DENND4A-208ENST00000568515 TTC12Q9H892 705 aaPredicted RBP25.88■■□□□ 1.73
DENND4A-208ENST00000568515 TNRQ92752 1358 aa25.88■■□□□ 1.73
DENND4A-208ENST00000568515 MAP3K5Q99683 1374 aa25.88■■□□□ 1.73
DENND4A-208ENST00000568515 SRGAP3O43295 1099 aa25.88■■□□□ 1.73
DENND4A-208ENST00000568515 KDM4AO75164 1064 aa25.87■■□□□ 1.73
DENND4A-208ENST00000568515 PRIMPOLQ96LW4 560 aa25.87■■□□□ 1.73
DENND4A-208ENST00000568515 ZBTB7CA1YPR0 619 aa25.87■■□□□ 1.73
DENND4A-208ENST00000568515 FIBPO43427 364 aa25.87■■□□□ 1.73
DENND4A-208ENST00000568515 CWC27Q6UX04 472 aaKnown RBP25.87■■□□□ 1.73
DENND4A-208ENST00000568515 SPG7Q9UQ90 795 aa25.86■■□□□ 1.73
DENND4A-208ENST00000568515 NGDNQ8NEJ9 315 aaKnown RBP25.85■■□□□ 1.73
DENND4A-208ENST00000568515 FUCA2Q9BTY2 467 aa25.85■■□□□ 1.73
DENND4A-208ENST00000568515 PTPRUQ92729 1446 aa25.85■■□□□ 1.73
DENND4A-208ENST00000568515 CASTP20810 708 aaKnown RBP25.85■■□□□ 1.73
DENND4A-208ENST00000568515 KLHL34Q8N239 644 aa25.85■■□□□ 1.73
DENND4A-208ENST00000568515 CPA1P15085 419 aa25.84■■□□□ 1.73
DENND4A-208ENST00000568515 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
DENND4A-208ENST00000568515 HYPKQ9NX55 129 aa25.84■■□□□ 1.73
DENND4A-208ENST00000568515 LARGE1O95461 756 aa25.84■■□□□ 1.73
DENND4A-208ENST00000568515 HMGN5P82970 282 aaKnown RBP25.84■■□□□ 1.73
DENND4A-208ENST00000568515 NBPF7P0C2Y1 421 aaPredicted RBP25.83■■□□□ 1.73
DENND4A-208ENST00000568515 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.73
DENND4A-208ENST00000568515 GIMAP6Q6P9H5 292 aa25.83■■□□□ 1.73
DENND4A-208ENST00000568515 SPTLC3Q9NUV7 552 aa25.83■■□□□ 1.73
DENND4A-208ENST00000568515 DIP2BQ9P265 1576 aa25.83■■□□□ 1.73
DENND4A-208ENST00000568515 GJB2P29033 226 aa25.82■■□□□ 1.72
DENND4A-208ENST00000568515 C17orf53Q8N3J3 647 aaPredicted RBP25.82■■□□□ 1.72
DENND4A-208ENST00000568515 MTMR6Q9Y217 621 aa25.82■■□□□ 1.72
DENND4A-208ENST00000568515 USP42Q9H9J4 1324 aaKnown RBP25.82■■□□□ 1.72
DENND4A-208ENST00000568515 LTKP29376 864 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 HSP90AB4PQ58FF6 505 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 CCDC83Q8IWF9 413 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 PLEKHG1Q9ULL1 1385 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 HOXC9P31274 260 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 DNM1Q05193 864 aaKnown RBP25.81■■□□□ 1.72
DENND4A-208ENST00000568515 GLRX3O76003 335 aaKnown RBP25.81■■□□□ 1.72
DENND4A-208ENST00000568515 ARID3AQ99856 593 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 DIAPH3Q9NSV4 1193 aa25.81■■□□□ 1.72
DENND4A-208ENST00000568515 TTC41PQ6P2S7 1318 aa25.8■■□□□ 1.72
DENND4A-208ENST00000568515 NLRP6P59044 892 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms