RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 ATP6V1DQ9Y5K8 247 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
ATXN3-250ENST00000568290 MSH6P52701 1360 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 KDRP35968 1356 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-250ENST00000568290 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATXN3-250ENST00000568290 MLECQ14165 292 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 MFSD10Q14728 455 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 RRS1Q15050 365 aaKnown RBP9.3□□□□□ -0.92
ATXN3-250ENST00000568290 RUFY2Q8WXA3 655 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 GPATCH3Q96I76 525 aa9.3□□□□□ -0.92
ATXN3-250ENST00000568290 MSNP26038 577 aaKnown RBP9.29□□□□□ -0.92
ATXN3-250ENST00000568290 NRXN3Q9Y4C0 1643 aa9.29□□□□□ -0.92
ATXN3-250ENST00000568290 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
ATXN3-250ENST00000568290 IGSF1Q8N6C5 1336 aa9.29□□□□□ -0.92
ATXN3-250ENST00000568290 MCM5P33992 734 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 ZNF445P59923 1031 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 ATP8B2P98198 1209 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-250ENST00000568290 KIAA1211Q6ZU35 1233 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 SIRT2Q8IXJ6 389 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 KCNH5Q8NCM2 988 aa9.28□□□□□ -0.92
ATXN3-250ENST00000568290 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-250ENST00000568290 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 ESPNB1AK53 854 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 HIP1O00291 1037 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 BAG4O95429 457 aaKnown RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 SDSP20132 328 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 THUMPD2Q9BTF0 503 aaKnown RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-250ENST00000568290 CRB1P82279 1406 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 ADAMTS13Q76LX8 1427 aa9.27□□□□□ -0.93
ATXN3-250ENST00000568290 SLIT1O75093 1534 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 ROBO2Q9HCK4 1378 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 ATP10DQ9P241 1426 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 TPM2P07951 284 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 GSPT1P15170 499 aaKnown RBP9.26□□□□□ -0.93
ATXN3-250ENST00000568290 MX1P20591 662 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 TERF1P54274 439 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 PDE1AP54750 535 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 FAM184AQ8NB25 1140 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 KIF2CQ99661 725 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 STAP2Q9UGK3 403 aa9.26□□□□□ -0.93
ATXN3-250ENST00000568290 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-250ENST00000568290 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 UBR1Q8IWV7 1749 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 FLIIQ13045 1269 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-250ENST00000568290 MCM10Q7L590 875 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 KIF1BPQ96EK5 621 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 IL17RAQ96F46 866 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 PPP1R9BQ96SB3 815 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 RIMS1Q86UR5 1692 aaKnown RBP9.25□□□□□ -0.93
ATXN3-250ENST00000568290 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 WDR33Q9C0J8 1336 aaKnown RBP9.25□□□□□ -0.93
ATXN3-250ENST00000568290 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
ATXN3-250ENST00000568290 CACNA1FO60840 1977 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 ARHGAP23Q9P227 1491 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 C2orf72A6NCS6 295 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 FAM83GA6ND36 823 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 HSP90AB2PQ58FF8 381 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 LHX8Q68G74 356 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 ZSCAN30Q86W11 494 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
ATXN3-250ENST00000568290 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
ATXN3-250ENST00000568290 NEK4P51957 841 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 FOXK1P85037 733 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 MTHFSDQ2M296 383 aaKnown RBP9.23□□□□□ -0.93
ATXN3-250ENST00000568290 PLEKHO1Q53GL0 409 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-250ENST00000568290 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 MTERF4Q7Z6M4 381 aaKnown RBP9.23□□□□□ -0.93
ATXN3-250ENST00000568290 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 ZSCAN31Q96LW9 406 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-250ENST00000568290 MEIS3Q99687 375 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
ATXN3-250ENST00000568290 OVOS2A0A0G2JMS6 1433 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 RGS12O14924 1447 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms