RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 SCN7AQ01118 1682 aa17.19■□□□□ 0.34
TSC2-220ENST00000568238 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
TSC2-220ENST00000568238 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
TSC2-220ENST00000568238 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
TSC2-220ENST00000568238 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
TSC2-220ENST00000568238 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
TSC2-220ENST00000568238 DDR1Q08345 913 aa17.17■□□□□ 0.34
TSC2-220ENST00000568238 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
TSC2-220ENST00000568238 ADCY9O60503 1353 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 FCHSD2O94868 740 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 STARD3NLO95772 234 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
TSC2-220ENST00000568238 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
TSC2-220ENST00000568238 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
TSC2-220ENST00000568238 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
TSC2-220ENST00000568238 DPEP1P16444 411 aa17.14■□□□□ 0.33
TSC2-220ENST00000568238 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
TSC2-220ENST00000568238 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
TSC2-220ENST00000568238 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
TSC2-220ENST00000568238 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
TSC2-220ENST00000568238 DLEC1Q9Y238 1755 aa17.13■□□□□ 0.33
TSC2-220ENST00000568238 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
TSC2-220ENST00000568238 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
TSC2-220ENST00000568238 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
TSC2-220ENST00000568238 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
TSC2-220ENST00000568238 TM4SF1P30408 202 aa17.12■□□□□ 0.33
TSC2-220ENST00000568238 MCM10Q7L590 875 aa17.12■□□□□ 0.33
TSC2-220ENST00000568238 LAMB4A4D0S4 1761 aa17.12■□□□□ 0.33
TSC2-220ENST00000568238 CEP350Q5VT06 3117 aa17.11■□□□□ 0.33
TSC2-220ENST00000568238 A0A087WZG4 1122 aa17.11■□□□□ 0.33
TSC2-220ENST00000568238 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
TSC2-220ENST00000568238 NFIXQ14938 502 aa17.11■□□□□ 0.33
TSC2-220ENST00000568238 KCNQ3O43525 872 aa17.1■□□□□ 0.33
TSC2-220ENST00000568238 NEFMP07197 916 aa17.1■□□□□ 0.33
TSC2-220ENST00000568238 C1QTNF8P60827 252 aa17.1■□□□□ 0.33
TSC2-220ENST00000568238 BCL2L12Q9HB09 334 aa17.1■□□□□ 0.33
TSC2-220ENST00000568238 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
TSC2-220ENST00000568238 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
TSC2-220ENST00000568238 KCNA3P22001 575 aa17.09■□□□□ 0.33
TSC2-220ENST00000568238 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
TSC2-220ENST00000568238 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
TSC2-220ENST00000568238 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
TSC2-220ENST00000568238 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
TSC2-220ENST00000568238 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
TSC2-220ENST00000568238 RALBP1Q15311 655 aa17.07■□□□□ 0.32
TSC2-220ENST00000568238 DALRD3Q5D0E6 543 aaKnown RBP17.07■□□□□ 0.32
TSC2-220ENST00000568238 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
TSC2-220ENST00000568238 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
TSC2-220ENST00000568238 SERPINB2P05120 415 aa17.06■□□□□ 0.32
TSC2-220ENST00000568238 CHRNA5P30532 468 aa17.06■□□□□ 0.32
TSC2-220ENST00000568238 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
TSC2-220ENST00000568238 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
TSC2-220ENST00000568238 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
TSC2-220ENST00000568238 A1BGP04217 495 aa17.05■□□□□ 0.32
TSC2-220ENST00000568238 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
TSC2-220ENST00000568238 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
TSC2-220ENST00000568238 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
TSC2-220ENST00000568238 TBC1D2BQ9UPU7 963 aa17.05■□□□□ 0.32
TSC2-220ENST00000568238 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
TSC2-220ENST00000568238 CARMIL3Q8ND23 1372 aa17.04■□□□□ 0.32
TSC2-220ENST00000568238 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
TSC2-220ENST00000568238 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
TSC2-220ENST00000568238 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
TSC2-220ENST00000568238 SBF1O95248 1867 aa17.03■□□□□ 0.32
TSC2-220ENST00000568238 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
TSC2-220ENST00000568238 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
TSC2-220ENST00000568238 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
TSC2-220ENST00000568238 TBC1D9BQ66K14 1250 aa17.03■□□□□ 0.32
TSC2-220ENST00000568238 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
TSC2-220ENST00000568238 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
TSC2-220ENST00000568238 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
TSC2-220ENST00000568238 ANP32CO43423 234 aa17.01■□□□□ 0.31
TSC2-220ENST00000568238 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
TSC2-220ENST00000568238 DZIP3Q86Y13 1208 aaKnown RBP17.01■□□□□ 0.31
TSC2-220ENST00000568238 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
TSC2-220ENST00000568238 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
TSC2-220ENST00000568238 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
TSC2-220ENST00000568238 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
TSC2-220ENST00000568238 H0YIN7 160 aa16.99■□□□□ 0.31
TSC2-220ENST00000568238 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
TSC2-220ENST00000568238 SETDB2Q96T68 719 aa16.99■□□□□ 0.31
TSC2-220ENST00000568238 ARFGEF2Q9Y6D5 1785 aa16.99■□□□□ 0.31
TSC2-220ENST00000568238 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
TSC2-220ENST00000568238 NPHP1O15259 732 aa16.98■□□□□ 0.31
TSC2-220ENST00000568238 PRR5LQ6MZQ0 368 aa16.98■□□□□ 0.31
TSC2-220ENST00000568238 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
TSC2-220ENST00000568238 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
TSC2-220ENST00000568238 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
TSC2-220ENST00000568238 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 PDE6BP35913 854 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
TSC2-220ENST00000568238 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
TSC2-220ENST00000568238 ST5P78524 1137 aa16.96■□□□□ 0.31
TSC2-220ENST00000568238 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
TSC2-220ENST00000568238 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms