RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 ZNF831Q5JPB2 1677 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 USP42Q9H9J4 1324 aaKnown RBP8.62□□□□□ -1.03
PTPN9-205ENST00000568108 ZPR1O75312 459 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 HSPA5P11021 654 aaKnown RBP8.62□□□□□ -1.03
PTPN9-205ENST00000568108 IL13P35225 146 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 RNF181Q9P0P0 153 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 KIAA1551Q9HCM1 1747 aa8.62□□□□□ -1.03
PTPN9-205ENST00000568108 POLRMTO00411 1230 aaKnown RBP8.61□□□□□ -1.03
PTPN9-205ENST00000568108 FSTL1Q12841 308 aa8.61□□□□□ -1.03
PTPN9-205ENST00000568108 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
PTPN9-205ENST00000568108 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
PTPN9-205ENST00000568108 RRAGCQ9HB90 399 aa8.61□□□□□ -1.03
PTPN9-205ENST00000568108 LGR6Q9HBX8 967 aa8.61□□□□□ -1.03
PTPN9-205ENST00000568108 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
PTPN9-205ENST00000568108 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
PTPN9-205ENST00000568108 HTRA3P83110 453 aa8.6□□□□□ -1.03
PTPN9-205ENST00000568108 SLC52A2Q9HAB3 445 aa8.6□□□□□ -1.03
PTPN9-205ENST00000568108 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
PTPN9-205ENST00000568108 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
PTPN9-205ENST00000568108 PLCB2Q00722 1185 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 SLC39A6Q13433 755 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 NFIXQ14938 502 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 KLRG1Q96E93 195 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
PTPN9-205ENST00000568108 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
PTPN9-205ENST00000568108 SERPINB2P05120 415 aa8.58□□□□□ -1.04
PTPN9-205ENST00000568108 HMOX1P09601 288 aa8.58□□□□□ -1.04
PTPN9-205ENST00000568108 TTLL6Q8N841 843 aa8.58□□□□□ -1.04
PTPN9-205ENST00000568108 ARFGEF1Q9Y6D6 1849 aa8.58□□□□□ -1.04
PTPN9-205ENST00000568108 LMNB1P20700 586 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 CANXP27824 592 aaKnown RBP8.57□□□□□ -1.04
PTPN9-205ENST00000568108 RASSF7Q02833 373 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
PTPN9-205ENST00000568108 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 MIER1Q8N108 512 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 JMYQ8N9B5 988 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 TJP1Q07157 1748 aa8.57□□□□□ -1.04
PTPN9-205ENST00000568108 GLTPD2A6NH11 291 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 H0YIN7 160 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
PTPN9-205ENST00000568108 STARD3NLO95772 234 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 VEGFAP15692 232 aaPredicted RBP8.56□□□□□ -1.04
PTPN9-205ENST00000568108 POLA2Q14181 598 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 COL15A1P39059 1388 aa8.56□□□□□ -1.04
PTPN9-205ENST00000568108 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
PTPN9-205ENST00000568108 A0A087WZG4 1122 aa8.55□□□□□ -1.04
PTPN9-205ENST00000568108 PRELPP51888 382 aa8.55□□□□□ -1.04
PTPN9-205ENST00000568108 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
PTPN9-205ENST00000568108 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
PTPN9-205ENST00000568108 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
PTPN9-205ENST00000568108 SPINK5Q9NQ38 1064 aaPredicted RBP8.55□□□□□ -1.04
PTPN9-205ENST00000568108 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
PTPN9-205ENST00000568108 SBF1O95248 1867 aa8.54□□□□□ -1.04
PTPN9-205ENST00000568108 ADAMTS7Q9UKP4 1686 aa8.54□□□□□ -1.04
PTPN9-205ENST00000568108 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
PTPN9-205ENST00000568108 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
PTPN9-205ENST00000568108 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
PTPN9-205ENST00000568108 ZNF622Q969S3 477 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPN9-205ENST00000568108 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
PTPN9-205ENST00000568108 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
PTPN9-205ENST00000568108 NFKBIEO00221 500 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
PTPN9-205ENST00000568108 PDE6BP35913 854 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 TEFQ10587 303 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 TBC1D9BQ66K14 1250 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 IL17REQ8NFR9 667 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
PTPN9-205ENST00000568108 BRIP1Q9BX63 1249 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 TEX13AQ9BXU3 409 aaPredicted RBP8.53□□□□□ -1.04
PTPN9-205ENST00000568108 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 TBC1D2BQ9UPU7 963 aa8.53□□□□□ -1.04
PTPN9-205ENST00000568108 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
PTPN9-205ENST00000568108 MRC1P22897 1456 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 CARMIL3Q8ND23 1372 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 POTECB2RU33 542 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
PTPN9-205ENST00000568108 C21orf2O43822 256 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 A1BGP04217 495 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.05
PTPN9-205ENST00000568108 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 ZNF790Q6PG37 636 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 NPM2Q86SE8 214 aaKnown RBP8.52□□□□□ -1.05
PTPN9-205ENST00000568108 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 RNF39Q9H2S5 420 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
PTPN9-205ENST00000568108 KIF7Q2M1P5 1343 aa8.52□□□□□ -1.05
PTPN9-205ENST00000568108 TNRC6CQ9HCJ0 1690 aaKnown RBP8.51□□□□□ -1.05
PTPN9-205ENST00000568108 NPHP1O15259 732 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 CAPN15O75808 1086 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 IL6STP40189 918 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms