RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
GTF3C1-208ENST00000567843 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
GTF3C1-208ENST00000567843 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
GTF3C1-208ENST00000567843 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 FCHSD2O94868 740 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 STARD3NLO95772 234 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 TM4SF1P30408 202 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 CHRNA5P30532 468 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 BICDL1Q6ZP65 573 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
GTF3C1-208ENST00000567843 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 A1BGP04217 495 aa16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 NFIXQ14938 502 aa16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
GTF3C1-208ENST00000567843 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 PRAMEF22A3QJZ6 481 aa16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 KCNA3P22001 575 aa16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
GTF3C1-208ENST00000567843 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-208ENST00000567843 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
GTF3C1-208ENST00000567843 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
GTF3C1-208ENST00000567843 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
GTF3C1-208ENST00000567843 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 SERPINB2P05120 415 aa16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 GPBP1L1Q9HC44 474 aaPredicted RBP16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
GTF3C1-208ENST00000567843 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
GTF3C1-208ENST00000567843 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
GTF3C1-208ENST00000567843 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
GTF3C1-208ENST00000567843 A0A087WZG4 1122 aa16.23■□□□□ 0.19
GTF3C1-208ENST00000567843 NEFMP07197 916 aa16.23■□□□□ 0.19
GTF3C1-208ENST00000567843 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
GTF3C1-208ENST00000567843 KIF13BQ9NQT8 1826 aa16.23■□□□□ 0.19
GTF3C1-208ENST00000567843 ADCY9O60503 1353 aa16.23■□□□□ 0.19
GTF3C1-208ENST00000567843 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
GTF3C1-208ENST00000567843 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-208ENST00000567843 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-208ENST00000567843 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-208ENST00000567843 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
GTF3C1-208ENST00000567843 CARMIL3Q8ND23 1372 aa16.21■□□□□ 0.19
GTF3C1-208ENST00000567843 HTATSF1O43719 755 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-208ENST00000567843 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-208ENST00000567843 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-208ENST00000567843 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
GTF3C1-208ENST00000567843 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
GTF3C1-208ENST00000567843 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
GTF3C1-208ENST00000567843 C2CD5Q86YS7 1000 aa16.19■□□□□ 0.18
GTF3C1-208ENST00000567843 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
GTF3C1-208ENST00000567843 RALBP1Q15311 655 aa16.18■□□□□ 0.18
GTF3C1-208ENST00000567843 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
GTF3C1-208ENST00000567843 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
GTF3C1-208ENST00000567843 PRR5LQ6MZQ0 368 aa16.17■□□□□ 0.18
GTF3C1-208ENST00000567843 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-208ENST00000567843 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
GTF3C1-208ENST00000567843 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-208ENST00000567843 H0YIN7 160 aa16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 NPHP1O15259 732 aa16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 RASSF7Q02833 373 aa16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
GTF3C1-208ENST00000567843 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
GTF3C1-208ENST00000567843 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
GTF3C1-208ENST00000567843 RNF181Q9P0P0 153 aa16.15■□□□□ 0.18
GTF3C1-208ENST00000567843 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-208ENST00000567843 RIPK4P57078 832 aa16.14■□□□□ 0.17
GTF3C1-208ENST00000567843 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
GTF3C1-208ENST00000567843 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-208ENST00000567843 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-208ENST00000567843 KIF3CO14782 793 aa16.13■□□□□ 0.17
GTF3C1-208ENST00000567843 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
GTF3C1-208ENST00000567843 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
GTF3C1-208ENST00000567843 CNBD1Q8NA66 436 aa16.13■□□□□ 0.17
GTF3C1-208ENST00000567843 NMRK2Q9NPI5 230 aa16.13■□□□□ 0.17
GTF3C1-208ENST00000567843 HLFQ16534 295 aa16.12■□□□□ 0.17
GTF3C1-208ENST00000567843 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-208ENST00000567843 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
GTF3C1-208ENST00000567843 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-208ENST00000567843 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 MYL6BP14649 208 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 PDE6BP35913 854 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 PRELPP51888 382 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 NBPF5PQ86XG9 351 aaPredicted RBP16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
GTF3C1-208ENST00000567843 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
GTF3C1-208ENST00000567843 C21orf2O43822 256 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms