RNA–Protein interactions for RNA: ENST00000567011.1

CPNE2-209, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-209ENST00000567011 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
CPNE2-209ENST00000567011 MRC1P22897 1456 aa17.16■□□□□ 0.34
CPNE2-209ENST00000567011 ZPR1O75312 459 aa17.15■□□□□ 0.34
CPNE2-209ENST00000567011 PRELPP51888 382 aa17.14■□□□□ 0.33
CPNE2-209ENST00000567011 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
CPNE2-209ENST00000567011 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
CPNE2-209ENST00000567011 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.33
CPNE2-209ENST00000567011 COL15A1P39059 1388 aa17.14■□□□□ 0.33
CPNE2-209ENST00000567011 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
CPNE2-209ENST00000567011 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
CPNE2-209ENST00000567011 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
CPNE2-209ENST00000567011 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
CPNE2-209ENST00000567011 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
CPNE2-209ENST00000567011 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
CPNE2-209ENST00000567011 PER1O15534 1290 aaPredicted RBP17.11■□□□□ 0.33
CPNE2-209ENST00000567011 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
CPNE2-209ENST00000567011 SERPINB2P05120 415 aa17.1■□□□□ 0.33
CPNE2-209ENST00000567011 BICDL1Q6ZP65 573 aa17.1■□□□□ 0.33
CPNE2-209ENST00000567011 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
CPNE2-209ENST00000567011 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
CPNE2-209ENST00000567011 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
CPNE2-209ENST00000567011 CCDC24Q8N4L8 307 aa17.08■□□□□ 0.32
CPNE2-209ENST00000567011 COL3A1P02461 1466 aaPredicted RBP17.07■□□□□ 0.32
CPNE2-209ENST00000567011 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
CPNE2-209ENST00000567011 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
CPNE2-209ENST00000567011 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
CPNE2-209ENST00000567011 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
CPNE2-209ENST00000567011 TBC1D9BQ66K14 1250 aa17.06■□□□□ 0.32
CPNE2-209ENST00000567011 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
CPNE2-209ENST00000567011 NFKBIEO00221 500 aa17.05■□□□□ 0.32
CPNE2-209ENST00000567011 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
CPNE2-209ENST00000567011 FSTL1Q12841 308 aa17.05■□□□□ 0.32
CPNE2-209ENST00000567011 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
CPNE2-209ENST00000567011 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 TTLL6Q8N841 843 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 KLRG1Q96E93 195 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
CPNE2-209ENST00000567011 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
CPNE2-209ENST00000567011 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
CPNE2-209ENST00000567011 KCNQ3O43525 872 aa17.03■□□□□ 0.32
CPNE2-209ENST00000567011 LMNB1P20700 586 aa17.03■□□□□ 0.32
CPNE2-209ENST00000567011 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
CPNE2-209ENST00000567011 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
CPNE2-209ENST00000567011 STARD3NLO95772 234 aa17.02■□□□□ 0.32
CPNE2-209ENST00000567011 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.31
CPNE2-209ENST00000567011 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 H0YIN7 160 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 A1BGP04217 495 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
CPNE2-209ENST00000567011 TEFQ10587 303 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 PRR5LQ6MZQ0 368 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 SBF1O95248 1867 aa17.01■□□□□ 0.31
CPNE2-209ENST00000567011 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
CPNE2-209ENST00000567011 POTECB2RU33 542 aa17■□□□□ 0.31
CPNE2-209ENST00000567011 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
CPNE2-209ENST00000567011 JMYQ8N9B5 988 aa17■□□□□ 0.31
CPNE2-209ENST00000567011 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
CPNE2-209ENST00000567011 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.31
CPNE2-209ENST00000567011 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
CPNE2-209ENST00000567011 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
CPNE2-209ENST00000567011 C21orf2O43822 256 aa16.99■□□□□ 0.31
CPNE2-209ENST00000567011 TNRC6CQ9HCJ0 1690 aaKnown RBP16.98■□□□□ 0.31
CPNE2-209ENST00000567011 A0A087WZG4 1122 aa16.98■□□□□ 0.31
CPNE2-209ENST00000567011 CAMTA2O94983 1202 aa16.98■□□□□ 0.31
CPNE2-209ENST00000567011 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
CPNE2-209ENST00000567011 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CPNE2-209ENST00000567011 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
CPNE2-209ENST00000567011 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
CPNE2-209ENST00000567011 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
CPNE2-209ENST00000567011 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
CPNE2-209ENST00000567011 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
CPNE2-209ENST00000567011 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
CPNE2-209ENST00000567011 IL6STP40189 918 aaPredicted RBP16.96■□□□□ 0.31
CPNE2-209ENST00000567011 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
CPNE2-209ENST00000567011 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
CPNE2-209ENST00000567011 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.31
CPNE2-209ENST00000567011 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
CPNE2-209ENST00000567011 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.3
CPNE2-209ENST00000567011 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
CPNE2-209ENST00000567011 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
CPNE2-209ENST00000567011 PDE6BP35913 854 aa16.95■□□□□ 0.3
CPNE2-209ENST00000567011 PCNTO95613 3336 aa16.95■□□□□ 0.3
CPNE2-209ENST00000567011 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
CPNE2-209ENST00000567011 ERFEQ4G0M1 354 aa16.94■□□□□ 0.3
CPNE2-209ENST00000567011 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
CPNE2-209ENST00000567011 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
CPNE2-209ENST00000567011 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
CPNE2-209ENST00000567011 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
CPNE2-209ENST00000567011 PRPF40BQ6NWY9 871 aaKnown RBP16.93■□□□□ 0.3
CPNE2-209ENST00000567011 MCM10Q7L590 875 aa16.93■□□□□ 0.3
CPNE2-209ENST00000567011 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
CPNE2-209ENST00000567011 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
CPNE2-209ENST00000567011 SIPA1L3O60292 1781 aaPredicted RBP16.92■□□□□ 0.3
CPNE2-209ENST00000567011 SRGNP10124 158 aa16.92■□□□□ 0.3
CPNE2-209ENST00000567011 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
CPNE2-209ENST00000567011 NPHP1O15259 732 aa16.91■□□□□ 0.3
CPNE2-209ENST00000567011 CAPN15O75808 1086 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms