RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
SIN3A-207ENST00000566640 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
SIN3A-207ENST00000566640 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
SIN3A-207ENST00000566640 SHANK3Q9BYB0 1731 aa9.69□□□□□ -0.86
SIN3A-207ENST00000566640 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 CYP27B1O15528 508 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 PDE4AP27815 886 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 RAPGEF4Q8WZA2 1011 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
SIN3A-207ENST00000566640 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 CCNL1Q9UK58 526 aaPredicted RBP9.68□□□□□ -0.86
SIN3A-207ENST00000566640 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 DOT1LQ8TEK3 1739 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
SIN3A-207ENST00000566640 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-207ENST00000566640 MFSD10Q14728 455 aa9.67□□□□□ -0.86
SIN3A-207ENST00000566640 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-207ENST00000566640 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
SIN3A-207ENST00000566640 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
SIN3A-207ENST00000566640 COL24A1Q17RW2 1714 aa9.67□□□□□ -0.86
SIN3A-207ENST00000566640 LY75O60449 1722 aa9.66□□□□□ -0.86
SIN3A-207ENST00000566640 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
SIN3A-207ENST00000566640 POLD1P28340 1107 aa9.66□□□□□ -0.86
SIN3A-207ENST00000566640 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
SIN3A-207ENST00000566640 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
SIN3A-207ENST00000566640 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
SIN3A-207ENST00000566640 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
SIN3A-207ENST00000566640 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
SIN3A-207ENST00000566640 WASHC2AQ641Q2 1341 aa9.64□□□□□ -0.87
SIN3A-207ENST00000566640 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
SIN3A-207ENST00000566640 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
SIN3A-207ENST00000566640 GPHNQ9NQX3 736 aaPredicted RBP9.64□□□□□ -0.87
SIN3A-207ENST00000566640 GPR162Q16538 588 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 PIGBQ92521 554 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 EYA1Q99502 592 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
SIN3A-207ENST00000566640 TUBGCP6Q96RT7 1819 aa9.62□□□□□ -0.87
SIN3A-207ENST00000566640 C2orf72A6NCS6 295 aa9.62□□□□□ -0.87
SIN3A-207ENST00000566640 YBX3P16989 372 aaKnown RBP eCLIP9.62□□□□□ -0.87
SIN3A-207ENST00000566640 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
SIN3A-207ENST00000566640 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
SIN3A-207ENST00000566640 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
SIN3A-207ENST00000566640 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
SIN3A-207ENST00000566640 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
SIN3A-207ENST00000566640 KIF3CO14782 793 aa9.61□□□□□ -0.87
SIN3A-207ENST00000566640 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
SIN3A-207ENST00000566640 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
SIN3A-207ENST00000566640 PKD1L3Q7Z443 1732 aa9.61□□□□□ -0.87
SIN3A-207ENST00000566640 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
SIN3A-207ENST00000566640 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
SIN3A-207ENST00000566640 PHKG2P15735 406 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
SIN3A-207ENST00000566640 C1QTNF8P60827 252 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 E2F4Q16254 413 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 CD2APQ9Y5K6 639 aa9.6□□□□□ -0.87
SIN3A-207ENST00000566640 IGSF1Q8N6C5 1336 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 GRIN3BO60391 1043 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 SSFA2P28290 1259 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 SIK1P57059 783 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 DSG2Q14126 1118 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 EIF4A2Q14240 407 aaKnown RBP9.59□□□□□ -0.87
SIN3A-207ENST00000566640 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 AK7Q96M32 723 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
SIN3A-207ENST00000566640 C5P01031 1676 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
SIN3A-207ENST00000566640 FOXK1P85037 733 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 ITPK1Q13572 414 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 CNGB1Q14028 1251 aaPredicted RBP9.58□□□□□ -0.88
SIN3A-207ENST00000566640 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 IFNL2Q8IZJ0 200 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 RNF166Q96A37 237 aaPredicted RBP9.58□□□□□ -0.88
SIN3A-207ENST00000566640 PANK3Q9H999 370 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 KDRP35968 1356 aa9.58□□□□□ -0.88
SIN3A-207ENST00000566640 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
SIN3A-207ENST00000566640 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
SIN3A-207ENST00000566640 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
SIN3A-207ENST00000566640 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
SIN3A-207ENST00000566640 ADCY9O60503 1353 aa9.56□□□□□ -0.88
SIN3A-207ENST00000566640 PHF14O94880 888 aa9.56□□□□□ -0.88
SIN3A-207ENST00000566640 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
SIN3A-207ENST00000566640 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
SIN3A-207ENST00000566640 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
SIN3A-207ENST00000566640 GNPATO15228 680 aa9.55□□□□□ -0.88
SIN3A-207ENST00000566640 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
SIN3A-207ENST00000566640 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
SIN3A-207ENST00000566640 KDM6AO15550 1401 aaPredicted RBP9.55□□□□□ -0.88
SIN3A-207ENST00000566640 ERVV-2B6SEH9 535 aa9.54□□□□□ -0.88
SIN3A-207ENST00000566640 ATP6V1AP38606 617 aa9.54□□□□□ -0.88
SIN3A-207ENST00000566640 DCAF5Q96JK2 942 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms