RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
MSLN-207ENST00000566549 IL27Q8NEV9 243 aa22.96■■□□□ 1.27
MSLN-207ENST00000566549 ARXQ96QS3 562 aa22.96■■□□□ 1.27
MSLN-207ENST00000566549 CACNA1FO60840 1977 aa22.96■■□□□ 1.27
MSLN-207ENST00000566549 CWF19L2Q2TBE0 894 aaKnown RBP22.96■■□□□ 1.27
MSLN-207ENST00000566549 MAP4K4O95819 1239 aaPredicted RBP22.95■■□□□ 1.26
MSLN-207ENST00000566549 POLA2Q14181 598 aa22.95■■□□□ 1.26
MSLN-207ENST00000566549 RGPD5Q99666 1765 aa22.95■■□□□ 1.26
MSLN-207ENST00000566549 RHPN1Q8TCX5 695 aa22.94■■□□□ 1.26
MSLN-207ENST00000566549 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
MSLN-207ENST00000566549 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
MSLN-207ENST00000566549 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
MSLN-207ENST00000566549 ESYT1Q9BSJ8 1104 aa22.92■■□□□ 1.26
MSLN-207ENST00000566549 STAP2Q9UGK3 403 aa22.92■■□□□ 1.26
MSLN-207ENST00000566549 CIZ1Q9ULV3 898 aaPredicted RBP22.92■■□□□ 1.26
MSLN-207ENST00000566549 NPHP3Q7Z494 1330 aa22.92■■□□□ 1.26
MSLN-207ENST00000566549 KSR2Q6VAB6 950 aa22.92■■□□□ 1.26
MSLN-207ENST00000566549 OVOS2A0A0G2JMS6 1433 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 HEG1Q9ULI3 1381 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 TRAK2O60296 914 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
MSLN-207ENST00000566549 ALS2Q96Q42 1657 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 RAB11FIP3O75154 756 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 PHKG2P15735 406 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 CHMLP26374 656 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 OS9Q13438 667 aaPredicted RBP22.91■■□□□ 1.26
MSLN-207ENST00000566549 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 CADPS2Q86UW7 1296 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 ANO2Q9NQ90 1003 aa22.91■■□□□ 1.26
MSLN-207ENST00000566549 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
MSLN-207ENST00000566549 MYL6BP14649 208 aa22.9■■□□□ 1.26
MSLN-207ENST00000566549 MEGF6O75095 1541 aa22.9■■□□□ 1.26
MSLN-207ENST00000566549 SLC52A2Q9HAB3 445 aa22.9■■□□□ 1.26
MSLN-207ENST00000566549 KDM6AO15550 1401 aaPredicted RBP22.9■■□□□ 1.26
MSLN-207ENST00000566549 SSFA2P28290 1259 aa22.89■■□□□ 1.26
MSLN-207ENST00000566549 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.26
MSLN-207ENST00000566549 HYPKQ9NX55 129 aa22.89■■□□□ 1.26
MSLN-207ENST00000566549 STRCP1A6NGW2 1772 aa22.89■■□□□ 1.25
MSLN-207ENST00000566549 ST18O60284 1047 aa22.89■■□□□ 1.25
MSLN-207ENST00000566549 SPG7Q9UQ90 795 aa22.89■■□□□ 1.25
MSLN-207ENST00000566549 DDX11L8A8MPP1 907 aa22.88■■□□□ 1.25
MSLN-207ENST00000566549 PIP4K2AP48426 406 aaPredicted RBP22.88■■□□□ 1.25
MSLN-207ENST00000566549 PA2G4Q9UQ80 394 aaKnown RBP22.88■■□□□ 1.25
MSLN-207ENST00000566549 PDIA6Q15084 440 aa22.87■■□□□ 1.25
MSLN-207ENST00000566549 IL25Q9H293 177 aa22.87■■□□□ 1.25
MSLN-207ENST00000566549 DDX21Q9NR30 783 aaKnown RBP eCLIP22.87■■□□□ 1.25
MSLN-207ENST00000566549 TNS3Q68CZ2 1445 aa22.87■■□□□ 1.25
MSLN-207ENST00000566549 RTN4Q9NQC3 1192 aaKnown RBP22.87■■□□□ 1.25
MSLN-207ENST00000566549 PALD1Q9ULE6 856 aa22.87■■□□□ 1.25
MSLN-207ENST00000566549 GBP4Q96PP9 640 aa22.86■■□□□ 1.25
MSLN-207ENST00000566549 ALDH1L1O75891 902 aa22.86■■□□□ 1.25
MSLN-207ENST00000566549 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
MSLN-207ENST00000566549 PI4K2BQ8TCG2 481 aa22.86■■□□□ 1.25
MSLN-207ENST00000566549 ZNF496Q96IT1 587 aaPredicted RBP22.86■■□□□ 1.25
MSLN-207ENST00000566549 CYP27B1O15528 508 aa22.85■■□□□ 1.25
MSLN-207ENST00000566549 DCCP43146 1447 aa22.85■■□□□ 1.25
MSLN-207ENST00000566549 DDX58O95786 925 aaKnown RBP22.84■■□□□ 1.25
MSLN-207ENST00000566549 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
MSLN-207ENST00000566549 NEK4P51957 841 aa22.84■■□□□ 1.25
MSLN-207ENST00000566549 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
MSLN-207ENST00000566549 AOX1Q06278 1338 aa22.84■■□□□ 1.25
MSLN-207ENST00000566549 SPATA31A3Q5VYP0 1347 aa22.84■■□□□ 1.25
MSLN-207ENST00000566549 LINS1Q8NG48 757 aa22.83■■□□□ 1.25
MSLN-207ENST00000566549 SUCLG2Q96I99 432 aa22.83■■□□□ 1.25
MSLN-207ENST00000566549 NOL8Q76FK4 1167 aaKnown RBP22.83■■□□□ 1.25
MSLN-207ENST00000566549 GRM8O00222 908 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 PKP1Q13835 747 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 HSP90AB4PQ58FF6 505 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 USP16Q9Y5T5 823 aa22.82■■□□□ 1.24
MSLN-207ENST00000566549 MCCP23508 829 aa22.81■■□□□ 1.24
MSLN-207ENST00000566549 BICC1Q9H694 974 aaKnown RBP22.81■■□□□ 1.24
MSLN-207ENST00000566549 IGKV5-2P06315 115 aa22.81■■□□□ 1.24
MSLN-207ENST00000566549 MTX1Q13505 466 aa22.81■■□□□ 1.24
MSLN-207ENST00000566549 COPS6Q7L5N1 327 aa22.81■■□□□ 1.24
MSLN-207ENST00000566549 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
MSLN-207ENST00000566549 BRINP3Q76B58 766 aa22.8■■□□□ 1.24
MSLN-207ENST00000566549 KAZALD1Q96I82 304 aa22.8■■□□□ 1.24
MSLN-207ENST00000566549 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
MSLN-207ENST00000566549 CLASRPQ8N2M8 674 aaKnown RBP22.79■■□□□ 1.24
MSLN-207ENST00000566549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.24
MSLN-207ENST00000566549 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
MSLN-207ENST00000566549 JARID2Q92833 1246 aaPredicted RBP22.79■■□□□ 1.24
MSLN-207ENST00000566549 MYD88Q99836 296 aa22.79■■□□□ 1.24
MSLN-207ENST00000566549 UPF3BQ9BZI7 483 aaKnown RBP22.78■■□□□ 1.24
MSLN-207ENST00000566549 ADAMTS7Q9UKP4 1686 aa22.78■■□□□ 1.24
MSLN-207ENST00000566549 CABP4P57796 275 aa22.78■■□□□ 1.24
MSLN-207ENST00000566549 CNTROBQ8N137 903 aa22.78■■□□□ 1.24
MSLN-207ENST00000566549 SIL1Q9H173 461 aa22.78■■□□□ 1.24
MSLN-207ENST00000566549 GOLGA6L3A6NEY3 463 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 KLHDC4Q8TBB5 520 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
MSLN-207ENST00000566549 COL18A1P39060 1754 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 NEXNQ0ZGT2 675 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 LARP1Q6PKG0 1096 aaKnown RBP22.77■■□□□ 1.24
MSLN-207ENST00000566549 DNAJC5Q9H3Z4 198 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.24
MSLN-207ENST00000566549 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms