RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
GDPD3-203ENST00000565704 ITPK1Q13572 414 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 PDE3AQ14432 1141 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
GDPD3-203ENST00000565704 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 CHPF2Q9P2E5 772 aa17.48■□□□□ 0.39
GDPD3-203ENST00000565704 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 TRIM27P14373 513 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 ATF7IPQ6VMQ6 1270 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
GDPD3-203ENST00000565704 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 TJP1Q07157 1748 aa17.47■□□□□ 0.39
GDPD3-203ENST00000565704 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
GDPD3-203ENST00000565704 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.39
GDPD3-203ENST00000565704 TRIM37O94972 964 aa17.46■□□□□ 0.39
GDPD3-203ENST00000565704 ZKSCAN2Q63HK3 967 aa17.46■□□□□ 0.39
GDPD3-203ENST00000565704 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
GDPD3-203ENST00000565704 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
GDPD3-203ENST00000565704 PTPRCP08575 1304 aa17.46■□□□□ 0.38
GDPD3-203ENST00000565704 LY75O60449 1722 aa17.45■□□□□ 0.38
GDPD3-203ENST00000565704 A1BGP04217 495 aa17.45■□□□□ 0.38
GDPD3-203ENST00000565704 RLBP1P12271 317 aa17.45■□□□□ 0.38
GDPD3-203ENST00000565704 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
GDPD3-203ENST00000565704 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
GDPD3-203ENST00000565704 PLSCR1O15162 318 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 STARD3NLO95772 234 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 ANXA1P04083 346 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 FLIIQ13045 1269 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
GDPD3-203ENST00000565704 PROM2Q8N271 834 aa17.44■□□□□ 0.38
GDPD3-203ENST00000565704 EP400Q96L91 3159 aa17.43■□□□□ 0.38
GDPD3-203ENST00000565704 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
GDPD3-203ENST00000565704 ABCC4O15439 1325 aa17.43■□□□□ 0.38
GDPD3-203ENST00000565704 RREB1Q92766 1687 aa17.42■□□□□ 0.38
GDPD3-203ENST00000565704 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
GDPD3-203ENST00000565704 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
GDPD3-203ENST00000565704 DZIP1LQ8IYY4 767 aaKnown RBP17.41■□□□□ 0.38
GDPD3-203ENST00000565704 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
GDPD3-203ENST00000565704 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
GDPD3-203ENST00000565704 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
GDPD3-203ENST00000565704 MS4A1P11836 297 aa17.4■□□□□ 0.38
GDPD3-203ENST00000565704 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
GDPD3-203ENST00000565704 COL5A3P25940 1745 aaPredicted RBP17.4■□□□□ 0.38
GDPD3-203ENST00000565704 ADCY9O60503 1353 aa17.4■□□□□ 0.38
GDPD3-203ENST00000565704 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
GDPD3-203ENST00000565704 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.37
GDPD3-203ENST00000565704 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
GDPD3-203ENST00000565704 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
GDPD3-203ENST00000565704 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
GDPD3-203ENST00000565704 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
GDPD3-203ENST00000565704 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
GDPD3-203ENST00000565704 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
GDPD3-203ENST00000565704 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
GDPD3-203ENST00000565704 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
GDPD3-203ENST00000565704 KCNQ4P56696 695 aa17.38■□□□□ 0.37
GDPD3-203ENST00000565704 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
GDPD3-203ENST00000565704 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
GDPD3-203ENST00000565704 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
GDPD3-203ENST00000565704 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
GDPD3-203ENST00000565704 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
GDPD3-203ENST00000565704 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
GDPD3-203ENST00000565704 F6X3S4 739 aa17.37■□□□□ 0.37
GDPD3-203ENST00000565704 MYL6BP14649 208 aa17.37■□□□□ 0.37
GDPD3-203ENST00000565704 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
GDPD3-203ENST00000565704 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
GDPD3-203ENST00000565704 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
GDPD3-203ENST00000565704 IBTKQ9P2D0 1353 aaPredicted RBP17.37■□□□□ 0.37
GDPD3-203ENST00000565704 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 APBA3O96018 575 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
GDPD3-203ENST00000565704 FKBP8Q14318 412 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
GDPD3-203ENST00000565704 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
GDPD3-203ENST00000565704 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
GDPD3-203ENST00000565704 MVPQ14764 893 aaKnown RBP17.35■□□□□ 0.37
GDPD3-203ENST00000565704 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
GDPD3-203ENST00000565704 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
GDPD3-203ENST00000565704 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
GDPD3-203ENST00000565704 COG6Q9Y2V7 657 aa17.35■□□□□ 0.37
GDPD3-203ENST00000565704 PXDNLA1KZ92 1463 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 RGPD3A6NKT7 1758 aaPredicted RBP17.34■□□□□ 0.37
GDPD3-203ENST00000565704 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
GDPD3-203ENST00000565704 BEND3Q5T5X7 828 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 RGPD4Q7Z3J3 1758 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 PLBD2Q8NHP8 589 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
GDPD3-203ENST00000565704 RPS6KA4O75676 772 aa17.33■□□□□ 0.36
GDPD3-203ENST00000565704 NEFLP07196 543 aa17.33■□□□□ 0.36
GDPD3-203ENST00000565704 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
GDPD3-203ENST00000565704 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
GDPD3-203ENST00000565704 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms