RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 CFAP53Q96M91 514 aa16.03■□□□□ 0.16
FANCA-218ENST00000565582 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
FANCA-218ENST00000565582 GPBP1L1Q9HC44 474 aaPredicted RBP16.03■□□□□ 0.16
FANCA-218ENST00000565582 POLRMTO00411 1230 aaKnown RBP16.02■□□□□ 0.16
FANCA-218ENST00000565582 ZPR1O75312 459 aa16.02■□□□□ 0.16
FANCA-218ENST00000565582 FCHSD2O94868 740 aa16.02■□□□□ 0.16
FANCA-218ENST00000565582 KCNA3P22001 575 aa16.02■□□□□ 0.16
FANCA-218ENST00000565582 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
FANCA-218ENST00000565582 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
FANCA-218ENST00000565582 CHRNA5P30532 468 aa16.01■□□□□ 0.15
FANCA-218ENST00000565582 AFDNP55196 1824 aaKnown RBP16.01■□□□□ 0.15
FANCA-218ENST00000565582 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
FANCA-218ENST00000565582 SCN7AQ01118 1682 aa16■□□□□ 0.15
FANCA-218ENST00000565582 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
FANCA-218ENST00000565582 TM4SF1P30408 202 aa16■□□□□ 0.15
FANCA-218ENST00000565582 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.154e-8■■■□□ 18.2
FANCA-218ENST00000565582 NFIXQ14938 502 aa16■□□□□ 0.15
FANCA-218ENST00000565582 ZNF790Q6PG37 636 aa16■□□□□ 0.15
FANCA-218ENST00000565582 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
FANCA-218ENST00000565582 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
FANCA-218ENST00000565582 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
FANCA-218ENST00000565582 NARFQ9UHQ1 456 aa16■□□□□ 0.15
FANCA-218ENST00000565582 CEP350Q5VT06 3117 aa16■□□□□ 0.15
FANCA-218ENST00000565582 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
FANCA-218ENST00000565582 KCNQ3O43525 872 aa15.99■□□□□ 0.15
FANCA-218ENST00000565582 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
FANCA-218ENST00000565582 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
FANCA-218ENST00000565582 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
FANCA-218ENST00000565582 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
FANCA-218ENST00000565582 STARD3NLO95772 234 aa15.97■□□□□ 0.15
FANCA-218ENST00000565582 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
FANCA-218ENST00000565582 MCM10Q7L590 875 aa15.97■□□□□ 0.15
FANCA-218ENST00000565582 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
FANCA-218ENST00000565582 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
FANCA-218ENST00000565582 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
FANCA-218ENST00000565582 DCTN1Q14203 1278 aa15.96■□□□□ 0.15
FANCA-218ENST00000565582 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.15
FANCA-218ENST00000565582 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
FANCA-218ENST00000565582 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
FANCA-218ENST00000565582 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
FANCA-218ENST00000565582 PRAMEF22A3QJZ6 481 aa15.94■□□□□ 0.14
FANCA-218ENST00000565582 A1BGP04217 495 aa15.94■□□□□ 0.14
FANCA-218ENST00000565582 SERPINB2P05120 415 aa15.94■□□□□ 0.14
FANCA-218ENST00000565582 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
FANCA-218ENST00000565582 DLEC1Q9Y238 1755 aa15.94■□□□□ 0.14
FANCA-218ENST00000565582 KIF3CO14782 793 aa15.93■□□□□ 0.14
FANCA-218ENST00000565582 C9orf131Q5VYM1 1079 aa15.93■□□□□ 0.14
FANCA-218ENST00000565582 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
FANCA-218ENST00000565582 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
FANCA-218ENST00000565582 BCORQ6W2J9 1755 aa15.92■□□□□ 0.14
FANCA-218ENST00000565582 COL11A2P13942 1736 aaPredicted RBP15.92■□□□□ 0.14
FANCA-218ENST00000565582 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
FANCA-218ENST00000565582 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
FANCA-218ENST00000565582 A0A087WZG4 1122 aa15.91■□□□□ 0.14
FANCA-218ENST00000565582 IL6STP40189 918 aaPredicted RBP15.91■□□□□ 0.14
FANCA-218ENST00000565582 RASSF7Q02833 373 aa15.91■□□□□ 0.14
FANCA-218ENST00000565582 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
FANCA-218ENST00000565582 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
FANCA-218ENST00000565582 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
FANCA-218ENST00000565582 RNF181Q9P0P0 153 aa15.9■□□□□ 0.14
FANCA-218ENST00000565582 USP16Q9Y5T5 823 aa15.9■□□□□ 0.14
FANCA-218ENST00000565582 CAMTA2O94983 1202 aa15.89■□□□□ 0.13
FANCA-218ENST00000565582 DLG5Q8TDM6 1919 aa15.89■□□□□ 0.13
FANCA-218ENST00000565582 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
FANCA-218ENST00000565582 LAMB4A4D0S4 1761 aa15.87■□□□□ 0.13
FANCA-218ENST00000565582 PRR5LQ6MZQ0 368 aa15.87■□□□□ 0.13
FANCA-218ENST00000565582 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
FANCA-218ENST00000565582 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
FANCA-218ENST00000565582 KDM3BQ7LBC6 1761 aa15.87■□□□□ 0.13
FANCA-218ENST00000565582 SBF1O95248 1867 aa15.86■□□□□ 0.13
FANCA-218ENST00000565582 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
FANCA-218ENST00000565582 H0YIN7 160 aa15.86■□□□□ 0.13
FANCA-218ENST00000565582 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
FANCA-218ENST00000565582 HSPA6P17066 643 aa15.86■□□□□ 0.13
FANCA-218ENST00000565582 PRELPP51888 382 aa15.86■□□□□ 0.13
FANCA-218ENST00000565582 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
FANCA-218ENST00000565582 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
FANCA-218ENST00000565582 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
FANCA-218ENST00000565582 NBPF15Q8N660 670 aa15.85■□□□□ 0.13
FANCA-218ENST00000565582 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
FANCA-218ENST00000565582 CNBD1Q8NA66 436 aa15.85■□□□□ 0.13
FANCA-218ENST00000565582 ZNF219Q9P2Y4 722 aaPredicted RBP15.85■□□□□ 0.13
FANCA-218ENST00000565582 NPHP1O15259 732 aa15.84■□□□□ 0.13
FANCA-218ENST00000565582 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
FANCA-218ENST00000565582 ZNF622Q969S3 477 aaKnown RBP eCLIP15.84■□□□□ 0.13
FANCA-218ENST00000565582 PLEKHF1Q96S99 279 aa15.84■□□□□ 0.13
FANCA-218ENST00000565582 SETDB2Q96T68 719 aa15.84■□□□□ 0.13
FANCA-218ENST00000565582 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
FANCA-218ENST00000565582 NFKBIEO00221 500 aa15.83■□□□□ 0.12
FANCA-218ENST00000565582 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
FANCA-218ENST00000565582 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.12
FANCA-218ENST00000565582 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
FANCA-218ENST00000565582 NEFMP07197 916 aa15.82■□□□□ 0.12
FANCA-218ENST00000565582 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
FANCA-218ENST00000565582 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
FANCA-218ENST00000565582 C21orf2O43822 256 aa15.81■□□□□ 0.12
FANCA-218ENST00000565582 TOMM70O94826 608 aa15.81■□□□□ 0.12
FANCA-218ENST00000565582 PDE6BP35913 854 aa15.81■□□□□ 0.12
FANCA-218ENST00000565582 ST5P78524 1137 aa15.81■□□□□ 0.12
FANCA-218ENST00000565582 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms