RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ABHD8Q96I13 439 aa15.67■□□□□ 0.1
CAPN3-215ENST00000565559 CHRNA5P30532 468 aa15.66■□□□□ 0.1
CAPN3-215ENST00000565559 DPY19L2Q6NUT2 758 aa15.66■□□□□ 0.1
CAPN3-215ENST00000565559 INSRP06213 1382 aa15.65■□□□□ 0.1
CAPN3-215ENST00000565559 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
CAPN3-215ENST00000565559 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
CAPN3-215ENST00000565559 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
CAPN3-215ENST00000565559 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
CAPN3-215ENST00000565559 CNTNAP4Q9C0A0 1308 aa15.65■□□□□ 0.1
CAPN3-215ENST00000565559 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
CAPN3-215ENST00000565559 RPS6KA4O75676 772 aa15.64■□□□□ 0.09
CAPN3-215ENST00000565559 NUBP1P53384 320 aa15.64■□□□□ 0.09
CAPN3-215ENST00000565559 HSP90AB2PQ58FF8 381 aa15.64■□□□□ 0.09
CAPN3-215ENST00000565559 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
CAPN3-215ENST00000565559 FLT4P35916 1363 aa15.63■□□□□ 0.09
CAPN3-215ENST00000565559 LBX1P52954 281 aa15.63■□□□□ 0.09
CAPN3-215ENST00000565559 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
CAPN3-215ENST00000565559 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-215ENST00000565559 KDRP35968 1356 aa15.62■□□□□ 0.09
CAPN3-215ENST00000565559 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CAPN3-215ENST00000565559 IFNL2Q8IZJ0 200 aa15.61■□□□□ 0.09
CAPN3-215ENST00000565559 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
CAPN3-215ENST00000565559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
CAPN3-215ENST00000565559 SBF1O95248 1867 aa15.61■□□□□ 0.09
CAPN3-215ENST00000565559 DDR1Q08345 913 aa15.6■□□□□ 0.09
CAPN3-215ENST00000565559 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
CAPN3-215ENST00000565559 CCDC85CA6NKD9 419 aa15.59■□□□□ 0.09
CAPN3-215ENST00000565559 POTECB2RU33 542 aa15.59■□□□□ 0.09
CAPN3-215ENST00000565559 WBP1LQ9NX94 342 aa15.59■□□□□ 0.09
CAPN3-215ENST00000565559 PHKG2P15735 406 aa15.58■□□□□ 0.08
CAPN3-215ENST00000565559 VEGFBP49765 207 aa15.58■□□□□ 0.08
CAPN3-215ENST00000565559 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
CAPN3-215ENST00000565559 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
CAPN3-215ENST00000565559 RGS19P49795 217 aa15.57■□□□□ 0.08
CAPN3-215ENST00000565559 TTLL6Q8N841 843 aa15.57■□□□□ 0.08
CAPN3-215ENST00000565559 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
CAPN3-215ENST00000565559 SRP68Q9UHB9 627 aaKnown RBP15.57■□□□□ 0.08
CAPN3-215ENST00000565559 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
CAPN3-215ENST00000565559 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
CAPN3-215ENST00000565559 FYB1O15117 783 aa15.56■□□□□ 0.08
CAPN3-215ENST00000565559 TIAM2Q8IVF5 1701 aa15.56■□□□□ 0.08
CAPN3-215ENST00000565559 HSPA8P11142 646 aaKnown RBP15.55■□□□□ 0.08
CAPN3-215ENST00000565559 MAP2K1Q02750 393 aaPredicted RBP15.55■□□□□ 0.08
CAPN3-215ENST00000565559 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
CAPN3-215ENST00000565559 ZNF831Q5JPB2 1677 aa15.54■□□□□ 0.08
CAPN3-215ENST00000565559 ERVV-2B6SEH9 535 aa15.54■□□□□ 0.08
CAPN3-215ENST00000565559 ZPR1O75312 459 aa15.54■□□□□ 0.08
CAPN3-215ENST00000565559 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 PASKQ96RG2 1323 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 IQCA1LA6NCM1 817 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 NFKBIEO00221 500 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 CRKLP46109 303 aaKnown RBP15.53■□□□□ 0.08
CAPN3-215ENST00000565559 DCAF8Q5TAQ9 597 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 LDHDQ86WU2 507 aa15.53■□□□□ 0.08
CAPN3-215ENST00000565559 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.08
CAPN3-215ENST00000565559 SLC24A1O60721 1099 aa15.52■□□□□ 0.08
CAPN3-215ENST00000565559 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.08
CAPN3-215ENST00000565559 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
CAPN3-215ENST00000565559 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
CAPN3-215ENST00000565559 TM4SF1P30408 202 aa15.52■□□□□ 0.08
CAPN3-215ENST00000565559 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-215ENST00000565559 H0YIN7 160 aa15.51■□□□□ 0.07
CAPN3-215ENST00000565559 C2CD5Q86YS7 1000 aa15.51■□□□□ 0.07
CAPN3-215ENST00000565559 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
CAPN3-215ENST00000565559 BEGAINQ9BUH8 593 aa15.51■□□□□ 0.07
CAPN3-215ENST00000565559 PTCD1O75127 700 aaKnown RBP15.5■□□□□ 0.07
CAPN3-215ENST00000565559 CABP4P57796 275 aa15.5■□□□□ 0.07
CAPN3-215ENST00000565559 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
CAPN3-215ENST00000565559 DEFB115Q30KQ5 88 aa15.5■□□□□ 0.07
CAPN3-215ENST00000565559 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
CAPN3-215ENST00000565559 DDNO94850 711 aaPredicted RBP15.49■□□□□ 0.07
CAPN3-215ENST00000565559 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
CAPN3-215ENST00000565559 EYA1Q99502 592 aa15.49■□□□□ 0.07
CAPN3-215ENST00000565559 RASSF10A6NK89 507 aa15.48■□□□□ 0.07
CAPN3-215ENST00000565559 FAM212AQ96EL1 285 aa15.48■□□□□ 0.07
CAPN3-215ENST00000565559 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
CAPN3-215ENST00000565559 WDR33Q9C0J8 1336 aaKnown RBP15.47■□□□□ 0.07
CAPN3-215ENST00000565559 NFIXQ14938 502 aa15.47■□□□□ 0.07
CAPN3-215ENST00000565559 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
CAPN3-215ENST00000565559 SERPINB2P05120 415 aa15.46■□□□□ 0.07
CAPN3-215ENST00000565559 EAPPQ56P03 285 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-215ENST00000565559 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
CAPN3-215ENST00000565559 TAF1DQ9H5J8 278 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-215ENST00000565559 ABT1Q9ULW3 272 aaKnown RBP15.46■□□□□ 0.07
CAPN3-215ENST00000565559 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
CAPN3-215ENST00000565559 C21orf2O43822 256 aa15.45■□□□□ 0.06
CAPN3-215ENST00000565559 ITGBL1O95965 494 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-215ENST00000565559 ZNF622Q969S3 477 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN3-215ENST00000565559 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-215ENST00000565559 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
CAPN3-215ENST00000565559 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
CAPN3-215ENST00000565559 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
CAPN3-215ENST00000565559 L3MBTL3Q96JM7 780 aaPredicted RBP15.44■□□□□ 0.06
CAPN3-215ENST00000565559 TESK2Q96S53 571 aa15.44■□□□□ 0.06
CAPN3-215ENST00000565559 VIRMAQ69YN4 1812 aaKnown RBP15.43■□□□□ 0.06
CAPN3-215ENST00000565559 PLEKHO1Q53GL0 409 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-215ENST00000565559 INTS5Q6P9B9 1019 aaKnown RBP15.43■□□□□ 0.06
CAPN3-215ENST00000565559 PAXIP1Q6ZW49 1069 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-215ENST00000565559 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms