RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
SPG7-211ENST00000565370 MMP10P09238 476 aa16.23■□□□□ 0.19
SPG7-211ENST00000565370 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
SPG7-211ENST00000565370 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
SPG7-211ENST00000565370 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
SPG7-211ENST00000565370 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
SPG7-211ENST00000565370 ZPR1O75312 459 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 GYS1P13807 737 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 GPR162Q16538 588 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
SPG7-211ENST00000565370 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
SPG7-211ENST00000565370 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
SPG7-211ENST00000565370 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
SPG7-211ENST00000565370 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
SPG7-211ENST00000565370 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
SPG7-211ENST00000565370 C10orf71Q711Q0 1435 aa16.2■□□□□ 0.18
SPG7-211ENST00000565370 A0A087WZG4 1122 aa16.2■□□□□ 0.18
SPG7-211ENST00000565370 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
SPG7-211ENST00000565370 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
SPG7-211ENST00000565370 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
SPG7-211ENST00000565370 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
SPG7-211ENST00000565370 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
SPG7-211ENST00000565370 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
SPG7-211ENST00000565370 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
SPG7-211ENST00000565370 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
SPG7-211ENST00000565370 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
SPG7-211ENST00000565370 KCNQ3O43525 872 aa16.16■□□□□ 0.18
SPG7-211ENST00000565370 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
SPG7-211ENST00000565370 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
SPG7-211ENST00000565370 RIPK4P57078 832 aa16.16■□□□□ 0.18
SPG7-211ENST00000565370 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
SPG7-211ENST00000565370 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
SPG7-211ENST00000565370 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
SPG7-211ENST00000565370 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
SPG7-211ENST00000565370 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
SPG7-211ENST00000565370 FKBP8Q14318 412 aa16.15■□□□□ 0.18
SPG7-211ENST00000565370 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
SPG7-211ENST00000565370 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
SPG7-211ENST00000565370 THUMPD2Q9BTF0 503 aaKnown RBP16.14■□□□□ 0.17
SPG7-211ENST00000565370 ANP32CO43423 234 aa16.13■□□□□ 0.17
SPG7-211ENST00000565370 TGFB2P61812 414 aa16.13■□□□□ 0.17
SPG7-211ENST00000565370 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
SPG7-211ENST00000565370 NRXN2Q9P2S2 1712 aa16.13■□□□□ 0.17
SPG7-211ENST00000565370 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
SPG7-211ENST00000565370 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
SPG7-211ENST00000565370 DDR1Q08345 913 aa16.12■□□□□ 0.17
SPG7-211ENST00000565370 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
SPG7-211ENST00000565370 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
SPG7-211ENST00000565370 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
SPG7-211ENST00000565370 A1BGP04217 495 aa16.11■□□□□ 0.17
SPG7-211ENST00000565370 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPG7-211ENST00000565370 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
SPG7-211ENST00000565370 MIS18AQ9NYP9 233 aa16.11■□□□□ 0.17
SPG7-211ENST00000565370 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
SPG7-211ENST00000565370 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
SPG7-211ENST00000565370 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
SPG7-211ENST00000565370 NFIXQ14938 502 aa16.1■□□□□ 0.17
SPG7-211ENST00000565370 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
SPG7-211ENST00000565370 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
SPG7-211ENST00000565370 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
SPG7-211ENST00000565370 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
SPG7-211ENST00000565370 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
SPG7-211ENST00000565370 TM4SF1P30408 202 aa16.09■□□□□ 0.17
SPG7-211ENST00000565370 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
SPG7-211ENST00000565370 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
SPG7-211ENST00000565370 NPHP1O15259 732 aa16.08■□□□□ 0.16
SPG7-211ENST00000565370 BICDL1Q6ZP65 573 aa16.08■□□□□ 0.16
SPG7-211ENST00000565370 BCL2L12Q9HB09 334 aa16.08■□□□□ 0.16
SPG7-211ENST00000565370 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
SPG7-211ENST00000565370 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
SPG7-211ENST00000565370 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
SPG7-211ENST00000565370 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
SPG7-211ENST00000565370 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
SPG7-211ENST00000565370 ARFGEF1Q9Y6D6 1849 aa16.07■□□□□ 0.16
SPG7-211ENST00000565370 CEP350Q5VT06 3117 aa16.06■□□□□ 0.16
SPG7-211ENST00000565370 RGL2O15211 777 aa16.06■□□□□ 0.16
SPG7-211ENST00000565370 SERPINB2P05120 415 aa16.06■□□□□ 0.16
SPG7-211ENST00000565370 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
SPG7-211ENST00000565370 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
SPG7-211ENST00000565370 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 DPEP1P16444 411 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 SETDB2Q96T68 719 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
SPG7-211ENST00000565370 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
SPG7-211ENST00000565370 CNBD1Q8NA66 436 aa16.04■□□□□ 0.16
SPG7-211ENST00000565370 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
SPG7-211ENST00000565370 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
SPG7-211ENST00000565370 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
SPG7-211ENST00000565370 ST5P78524 1137 aa16.03■□□□□ 0.16
SPG7-211ENST00000565370 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
SPG7-211ENST00000565370 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
SPG7-211ENST00000565370 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
SPG7-211ENST00000565370 APAF1O14727 1248 aa16.02■□□□□ 0.16
SPG7-211ENST00000565370 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
SPG7-211ENST00000565370 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms