RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 RNMTO43148 476 aaKnown RBP25.37■■□□□ 1.65
NME3-207ENST00000564628 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
NME3-207ENST00000564628 USPL1Q5W0Q7 1092 aa25.37■■□□□ 1.65
NME3-207ENST00000564628 KCPQ6ZWJ8 1503 aa25.37■■□□□ 1.65
NME3-207ENST00000564628 RBM46Q8TBY0 533 aaKnown RBP25.36■■□□□ 1.65
NME3-207ENST00000564628 CHRNA5P30532 468 aa25.35■■□□□ 1.65
NME3-207ENST00000564628 VSIG10Q8N0Z9 540 aa25.35■■□□□ 1.65
NME3-207ENST00000564628 NARFQ9UHQ1 456 aa25.35■■□□□ 1.65
NME3-207ENST00000564628 KDM2BQ8NHM5 1336 aa25.34■■□□□ 1.65
NME3-207ENST00000564628 COL15A1P39059 1388 aa25.33■■□□□ 1.65
NME3-207ENST00000564628 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.65
NME3-207ENST00000564628 HMOX1P09601 288 aa25.33■■□□□ 1.65
NME3-207ENST00000564628 SLC39A6Q13433 755 aa25.33■■□□□ 1.65
NME3-207ENST00000564628 DNAJC5GQ8N7S2 189 aa25.33■■□□□ 1.65
NME3-207ENST00000564628 MTHFSDQ2M296 383 aaKnown RBP25.32■■□□□ 1.64
NME3-207ENST00000564628 CFAP53Q96M91 514 aa25.32■■□□□ 1.64
NME3-207ENST00000564628 RNF181Q9P0P0 153 aa25.32■■□□□ 1.64
NME3-207ENST00000564628 NRXN2Q9P2S2 1712 aa25.32■■□□□ 1.64
NME3-207ENST00000564628 NFIXQ14938 502 aa25.31■■□□□ 1.64
NME3-207ENST00000564628 RALBP1Q15311 655 aa25.31■■□□□ 1.64
NME3-207ENST00000564628 C16orf71Q8IYS4 520 aaPredicted RBP25.31■■□□□ 1.64
NME3-207ENST00000564628 ZBTB1Q9Y2K1 713 aa25.31■■□□□ 1.64
NME3-207ENST00000564628 ZNF316A6NFI3 1004 aaPredicted RBP25.3■■□□□ 1.64
NME3-207ENST00000564628 UBR2Q8IWV8 1755 aa25.29■■□□□ 1.64
NME3-207ENST00000564628 AFDNP55196 1824 aaKnown RBP25.29■■□□□ 1.64
NME3-207ENST00000564628 FSTL1Q12841 308 aa25.29■■□□□ 1.64
NME3-207ENST00000564628 SBF1O95248 1867 aa25.29■■□□□ 1.64
NME3-207ENST00000564628 ZC3H4Q9UPT8 1303 aaKnown RBP25.29■■□□□ 1.64
NME3-207ENST00000564628 BCL2L12Q9HB09 334 aa25.28■■□□□ 1.64
NME3-207ENST00000564628 TNRC6CQ9HCJ0 1690 aaKnown RBP25.28■■□□□ 1.64
NME3-207ENST00000564628 WDR90Q96KV7 1748 aa25.28■■□□□ 1.64
NME3-207ENST00000564628 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
NME3-207ENST00000564628 SERPINB2P05120 415 aa25.26■■□□□ 1.63
NME3-207ENST00000564628 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
NME3-207ENST00000564628 STARD3NLO95772 234 aa25.25■■□□□ 1.63
NME3-207ENST00000564628 TTC5Q8N0Z6 440 aa25.24■■□□□ 1.63
NME3-207ENST00000564628 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
NME3-207ENST00000564628 EIF5P55010 431 aaKnown RBP25.23■■□□□ 1.63
NME3-207ENST00000564628 TTLL6Q8N841 843 aa25.23■■□□□ 1.63
NME3-207ENST00000564628 A0A087WZG4 1122 aa25.22■■□□□ 1.63
NME3-207ENST00000564628 LMNB1P20700 586 aa25.22■■□□□ 1.63
NME3-207ENST00000564628 CANXP27824 592 aaKnown RBP25.22■■□□□ 1.63
NME3-207ENST00000564628 NUDCQ9Y266 331 aa25.22■■□□□ 1.63
NME3-207ENST00000564628 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
NME3-207ENST00000564628 RASSF7Q02833 373 aa25.2■■□□□ 1.62
NME3-207ENST00000564628 C2CD5Q86YS7 1000 aa25.2■■□□□ 1.62
NME3-207ENST00000564628 TEX13AQ9BXU3 409 aaPredicted RBP25.2■■□□□ 1.62
NME3-207ENST00000564628 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.62
NME3-207ENST00000564628 H0YIN7 160 aa25.19■■□□□ 1.62
NME3-207ENST00000564628 SMC1BQ8NDV3 1235 aa25.19■■□□□ 1.62
NME3-207ENST00000564628 GAS2L2Q8NHY3 880 aa25.19■■□□□ 1.62
NME3-207ENST00000564628 KLRG1Q96E93 195 aa25.19■■□□□ 1.62
NME3-207ENST00000564628 ZNF496Q96IT1 587 aaPredicted RBP25.19■■□□□ 1.62
NME3-207ENST00000564628 PRKRIP1Q9H875 184 aaPredicted RBP25.19■■□□□ 1.62
NME3-207ENST00000564628 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 GNAT3A8MTJ3 354 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 TEFQ10587 303 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 PDZRN3Q9UPQ7 1066 aa25.18■■□□□ 1.62
NME3-207ENST00000564628 GLTPD2A6NH11 291 aa25.17■■□□□ 1.62
NME3-207ENST00000564628 PRELPP51888 382 aa25.17■■□□□ 1.62
NME3-207ENST00000564628 JMYQ8N9B5 988 aa25.17■■□□□ 1.62
NME3-207ENST00000564628 IL17REQ8NFR9 667 aa25.17■■□□□ 1.62
NME3-207ENST00000564628 SIPA1L3O60292 1781 aaPredicted RBP25.17■■□□□ 1.62
NME3-207ENST00000564628 SCN7AQ01118 1682 aa25.17■■□□□ 1.62
NME3-207ENST00000564628 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
NME3-207ENST00000564628 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
NME3-207ENST00000564628 IL6STP40189 918 aaPredicted RBP25.15■■□□□ 1.62
NME3-207ENST00000564628 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
NME3-207ENST00000564628 VEGFAP15692 232 aaPredicted RBP25.14■■□□□ 1.62
NME3-207ENST00000564628 PRKAR2BP31323 418 aa25.14■■□□□ 1.62
NME3-207ENST00000564628 HTRA3P83110 453 aa25.14■■□□□ 1.62
NME3-207ENST00000564628 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
NME3-207ENST00000564628 BRIP1Q9BX63 1249 aa25.14■■□□□ 1.62
NME3-207ENST00000564628 TIAM2Q8IVF5 1701 aa25.14■■□□□ 1.61
NME3-207ENST00000564628 NFKBIEO00221 500 aa25.13■■□□□ 1.61
NME3-207ENST00000564628 PDE6BP35913 854 aa25.13■■□□□ 1.61
NME3-207ENST00000564628 CEMIPQ8WUJ3 1361 aa25.13■■□□□ 1.61
NME3-207ENST00000564628 ANKRD31Q8N7Z5 1873 aa25.13■■□□□ 1.61
NME3-207ENST00000564628 PHACTR3Q96KR7 559 aa25.12■■□□□ 1.61
NME3-207ENST00000564628 FMNL2Q96PY5 1086 aa25.12■■□□□ 1.61
NME3-207ENST00000564628 PRR5LQ6MZQ0 368 aa25.11■■□□□ 1.61
NME3-207ENST00000564628 TBC1D2BQ9UPU7 963 aa25.1■■□□□ 1.61
NME3-207ENST00000564628 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
NME3-207ENST00000564628 ZNF622Q969S3 477 aaKnown RBP eCLIP25.09■■□□□ 1.61
NME3-207ENST00000564628 DLG5Q8TDM6 1919 aa25.09■■□□□ 1.61
NME3-207ENST00000564628 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
NME3-207ENST00000564628 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
NME3-207ENST00000564628 COL11A2P13942 1736 aaPredicted RBP25.08■■□□□ 1.61
NME3-207ENST00000564628 CAMTA2O94983 1202 aa25.07■■□□□ 1.6
NME3-207ENST00000564628 DPY19L2Q6NUT2 758 aa25.07■■□□□ 1.6
NME3-207ENST00000564628 SETDB2Q96T68 719 aa25.07■■□□□ 1.6
NME3-207ENST00000564628 A1BGP04217 495 aa25.06■■□□□ 1.6
NME3-207ENST00000564628 CNBD1Q8NA66 436 aa25.06■■□□□ 1.6
NME3-207ENST00000564628 FER1L6Q2WGJ9 1857 aa25.06■■□□□ 1.6
NME3-207ENST00000564628 LTBP3Q9NS15 1303 aa25.06■■□□□ 1.6
NME3-207ENST00000564628 BTBD11A6QL63 1104 aa25.05■■□□□ 1.6
NME3-207ENST00000564628 C21orf2O43822 256 aa25.05■■□□□ 1.6
NME3-207ENST00000564628 DICER1Q9UPY3 1922 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms