RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TERF1P54274 439 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 PDE1AP54750 535 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 FAM184AQ8NB25 1140 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 KIF2CQ99661 725 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 STAP2Q9UGK3 403 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-249ENST00000564606 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 UBR1Q8IWV7 1749 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 FLIIQ13045 1269 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-249ENST00000564606 MCM10Q7L590 875 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 KIF1BPQ96EK5 621 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 IL17RAQ96F46 866 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 PPP1R9BQ96SB3 815 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 RIMS1Q86UR5 1692 aaKnown RBP9.25□□□□□ -0.93
ATXN3-249ENST00000564606 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 WDR33Q9C0J8 1336 aaKnown RBP9.25□□□□□ -0.93
ATXN3-249ENST00000564606 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
ATXN3-249ENST00000564606 CACNA1FO60840 1977 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 ARHGAP23Q9P227 1491 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 FAM83GA6ND36 823 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 NLRP6P59044 892 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 HSP90AB2PQ58FF8 381 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 ZSCAN30Q86W11 494 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
ATXN3-249ENST00000564606 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
ATXN3-249ENST00000564606 NEK4P51957 841 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 MTHFSDQ2M296 383 aaKnown RBP9.23□□□□□ -0.93
ATXN3-249ENST00000564606 PLEKHO1Q53GL0 409 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-249ENST00000564606 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 MTERF4Q7Z6M4 381 aaKnown RBP9.23□□□□□ -0.93
ATXN3-249ENST00000564606 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 ZSCAN31Q96LW9 406 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-249ENST00000564606 MEIS3Q99687 375 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
ATXN3-249ENST00000564606 OVOS2A0A0G2JMS6 1433 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 RGS12O14924 1447 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 GLRX3O76003 335 aaKnown RBP9.22□□□□□ -0.93
ATXN3-249ENST00000564606 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-249ENST00000564606 TPM3P06753 285 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 CUL4AQ13619 759 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 UVSSAQ2YD98 709 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 TICAM2Q86XR7 235 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-249ENST00000564606 MAP7D2Q96T17 732 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 EYA1Q99502 592 aa9.22□□□□□ -0.93
ATXN3-249ENST00000564606 ZKSCAN1P17029 563 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-249ENST00000564606 PSMA5P28066 241 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 SSFA2P28290 1259 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 HOXC9P31274 260 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 TEFQ10587 303 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 ANKRD1Q15327 319 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 CLASRPQ8N2M8 674 aaKnown RBP9.21□□□□□ -0.94
ATXN3-249ENST00000564606 SSH3Q8TE77 659 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 RILPL2Q969X0 211 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
ATXN3-249ENST00000564606 SH2B1Q9NRF2 756 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-249ENST00000564606 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 RRP9O43818 475 aaKnown RBP9.2□□□□□ -0.94
ATXN3-249ENST00000564606 PDCP20941 246 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 CHMLP26374 656 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
ATXN3-249ENST00000564606 DBF4Q9UBU7 674 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-249ENST00000564606 BRD1O95696 1058 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 FBLN1P23142 703 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 OS9Q13438 667 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-249ENST00000564606 ZSCAN23Q3MJ62 389 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
ATXN3-249ENST00000564606 IP6K1Q92551 441 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 RAD50Q92878 1312 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
ATXN3-249ENST00000564606 APBB1O00213 710 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
ATXN3-249ENST00000564606 ANKLE2Q86XL3 938 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms