RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
LINC01858-201ENST00000564534 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
LINC01858-201ENST00000564534 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
LINC01858-201ENST00000564534 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.52
LINC01858-201ENST00000564534 CALD1Q05682 793 aaKnown RBP11.76□□□□□ -0.53
LINC01858-201ENST00000564534 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
LINC01858-201ENST00000564534 KDM6AO15550 1401 aaPredicted RBP11.76□□□□□ -0.53
LINC01858-201ENST00000564534 MCM10Q7L590 875 aa11.76□□□□□ -0.53
LINC01858-201ENST00000564534 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
LINC01858-201ENST00000564534 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
LINC01858-201ENST00000564534 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
LINC01858-201ENST00000564534 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
LINC01858-201ENST00000564534 TEFQ10587 303 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
LINC01858-201ENST00000564534 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 BCL9O00512 1426 aa11.75□□□□□ -0.53
LINC01858-201ENST00000564534 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 FAM196AQ6ZSG2 479 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
LINC01858-201ENST00000564534 POTEMA6NI47 508 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 CABP4P57796 275 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 MFRPQ9BY79 579 aa11.74□□□□□ -0.53
LINC01858-201ENST00000564534 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
LINC01858-201ENST00000564534 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
LINC01858-201ENST00000564534 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
LINC01858-201ENST00000564534 DOT1LQ8TEK3 1739 aa11.73□□□□□ -0.53
LINC01858-201ENST00000564534 FAM182BQ5T319 152 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
LINC01858-201ENST00000564534 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 MRC1P22897 1456 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 IL16Q14005 1332 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 ACSBG1Q96GR2 724 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 EP400Q96L91 3159 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
LINC01858-201ENST00000564534 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.54
LINC01858-201ENST00000564534 GNAI1P63096 354 aa11.71□□□□□ -0.54
LINC01858-201ENST00000564534 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.54
LINC01858-201ENST00000564534 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.54
LINC01858-201ENST00000564534 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
LINC01858-201ENST00000564534 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
LINC01858-201ENST00000564534 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
LINC01858-201ENST00000564534 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
LINC01858-201ENST00000564534 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
LINC01858-201ENST00000564534 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
LINC01858-201ENST00000564534 ITGB4P16144 1822 aa11.69□□□□□ -0.54
LINC01858-201ENST00000564534 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
LINC01858-201ENST00000564534 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
LINC01858-201ENST00000564534 E9PSI1 815 aa11.69□□□□□ -0.54
LINC01858-201ENST00000564534 TSPYL4Q9UJ04 414 aa11.69□□□□□ -0.54
LINC01858-201ENST00000564534 SBF2Q86WG5 1849 aa11.68□□□□□ -0.54
LINC01858-201ENST00000564534 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
LINC01858-201ENST00000564534 PIGBQ92521 554 aa11.68□□□□□ -0.54
LINC01858-201ENST00000564534 CHL1O00533 1208 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 KCNQ2O43526 872 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
LINC01858-201ENST00000564534 ST18O60284 1047 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 TRIM37O94972 964 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 ZNF853P0CG23 659 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
LINC01858-201ENST00000564534 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
LINC01858-201ENST00000564534 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
LINC01858-201ENST00000564534 SMARCC1Q92922 1105 aaPredicted RBP11.66□□□□□ -0.54
LINC01858-201ENST00000564534 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
LINC01858-201ENST00000564534 BTAF1O14981 1849 aa11.65□□□□□ -0.54
LINC01858-201ENST00000564534 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
LINC01858-201ENST00000564534 PAPPAQ13219 1627 aa11.65□□□□□ -0.54
LINC01858-201ENST00000564534 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
LINC01858-201ENST00000564534 SLC39A6Q13433 755 aa11.65□□□□□ -0.55
LINC01858-201ENST00000564534 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.55
LINC01858-201ENST00000564534 ATG3Q9NT62 314 aa11.65□□□□□ -0.55
LINC01858-201ENST00000564534 ASAP1Q9ULH1 1129 aa11.65□□□□□ -0.55
LINC01858-201ENST00000564534 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
LINC01858-201ENST00000564534 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
LINC01858-201ENST00000564534 PALLDQ8WX93 1383 aa11.63□□□□□ -0.55
LINC01858-201ENST00000564534 PTF1AQ7RTS3 328 aa11.63□□□□□ -0.55
LINC01858-201ENST00000564534 KCNQ3O43525 872 aa11.63□□□□□ -0.55
LINC01858-201ENST00000564534 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
LINC01858-201ENST00000564534 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
LINC01858-201ENST00000564534 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
LINC01858-201ENST00000564534 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
LINC01858-201ENST00000564534 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
LINC01858-201ENST00000564534 APBA3O96018 575 aa11.62□□□□□ -0.55
LINC01858-201ENST00000564534 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
LINC01858-201ENST00000564534 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
LINC01858-201ENST00000564534 KCPQ6ZWJ8 1503 aa11.61□□□□□ -0.55
LINC01858-201ENST00000564534 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms