RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
KNOP1-202ENST00000564480 KNSTRNQ9Y448 316 aa18.79■□□□□ 0.6
KNOP1-202ENST00000564480 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
KNOP1-202ENST00000564480 ZPR1O75312 459 aa18.77■□□□□ 0.6
KNOP1-202ENST00000564480 RASSF7Q02833 373 aa18.77■□□□□ 0.6
KNOP1-202ENST00000564480 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
KNOP1-202ENST00000564480 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
KNOP1-202ENST00000564480 MRC1P22897 1456 aa18.76■□□□□ 0.59
KNOP1-202ENST00000564480 SBF1O95248 1867 aa18.74■□□□□ 0.59
KNOP1-202ENST00000564480 COL15A1P39059 1388 aa18.74■□□□□ 0.59
KNOP1-202ENST00000564480 WDR90Q96KV7 1748 aa18.74■□□□□ 0.59
KNOP1-202ENST00000564480 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
KNOP1-202ENST00000564480 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
KNOP1-202ENST00000564480 SERPINB2P05120 415 aa18.73■□□□□ 0.59
KNOP1-202ENST00000564480 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
KNOP1-202ENST00000564480 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
KNOP1-202ENST00000564480 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
KNOP1-202ENST00000564480 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
KNOP1-202ENST00000564480 FSTL1Q12841 308 aa18.72■□□□□ 0.59
KNOP1-202ENST00000564480 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
KNOP1-202ENST00000564480 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
KNOP1-202ENST00000564480 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
KNOP1-202ENST00000564480 VSIG10Q8N0Z9 540 aa18.7■□□□□ 0.58
KNOP1-202ENST00000564480 JMYQ8N9B5 988 aa18.7■□□□□ 0.58
KNOP1-202ENST00000564480 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
KNOP1-202ENST00000564480 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
KNOP1-202ENST00000564480 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
KNOP1-202ENST00000564480 NFKBIEO00221 500 aa18.68■□□□□ 0.58
KNOP1-202ENST00000564480 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
KNOP1-202ENST00000564480 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
KNOP1-202ENST00000564480 COL13A1Q5TAT6 717 aaPredicted RBP18.68■□□□□ 0.58
KNOP1-202ENST00000564480 CCDC24Q8N4L8 307 aa18.68■□□□□ 0.58
KNOP1-202ENST00000564480 TTLL6Q8N841 843 aa18.68■□□□□ 0.58
KNOP1-202ENST00000564480 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
KNOP1-202ENST00000564480 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
KNOP1-202ENST00000564480 LMNB1P20700 586 aa18.67■□□□□ 0.58
KNOP1-202ENST00000564480 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
KNOP1-202ENST00000564480 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
KNOP1-202ENST00000564480 UBR2Q8IWV8 1755 aa18.66■□□□□ 0.58
KNOP1-202ENST00000564480 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
KNOP1-202ENST00000564480 POTECB2RU33 542 aa18.66■□□□□ 0.58
KNOP1-202ENST00000564480 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
KNOP1-202ENST00000564480 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
KNOP1-202ENST00000564480 H0YIN7 160 aa18.65■□□□□ 0.58
KNOP1-202ENST00000564480 SMC1BQ8NDV3 1235 aa18.65■□□□□ 0.58
KNOP1-202ENST00000564480 TBC1D2BQ9UPU7 963 aa18.65■□□□□ 0.58
KNOP1-202ENST00000564480 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
KNOP1-202ENST00000564480 VEGFAP15692 232 aaPredicted RBP18.64■□□□□ 0.57
KNOP1-202ENST00000564480 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
KNOP1-202ENST00000564480 ZC3H4Q9UPT8 1303 aaKnown RBP18.64■□□□□ 0.57
KNOP1-202ENST00000564480 STARD3NLO95772 234 aa18.63■□□□□ 0.57
KNOP1-202ENST00000564480 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
KNOP1-202ENST00000564480 ZNF790Q6PG37 636 aa18.63■□□□□ 0.57
KNOP1-202ENST00000564480 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
KNOP1-202ENST00000564480 HEG1Q9ULI3 1381 aa18.63■□□□□ 0.57
KNOP1-202ENST00000564480 KCNQ3O43525 872 aa18.62■□□□□ 0.57
KNOP1-202ENST00000564480 A1BGP04217 495 aa18.62■□□□□ 0.57
KNOP1-202ENST00000564480 PRR5LQ6MZQ0 368 aa18.62■□□□□ 0.57
KNOP1-202ENST00000564480 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
KNOP1-202ENST00000564480 ANKRD31Q8N7Z5 1873 aa18.62■□□□□ 0.57
KNOP1-202ENST00000564480 C21orf2O43822 256 aa18.61■□□□□ 0.57
KNOP1-202ENST00000564480 ZNF622Q969S3 477 aaKnown RBP eCLIP18.61■□□□□ 0.576e-11■■■■■ 27.9
KNOP1-202ENST00000564480 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
KNOP1-202ENST00000564480 A0A087WZG4 1122 aa18.6■□□□□ 0.57
KNOP1-202ENST00000564480 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
KNOP1-202ENST00000564480 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
KNOP1-202ENST00000564480 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
KNOP1-202ENST00000564480 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
KNOP1-202ENST00000564480 CCDC88AQ3V6T2 1871 aa18.59■□□□□ 0.57
KNOP1-202ENST00000564480 TEFQ10587 303 aa18.59■□□□□ 0.57
KNOP1-202ENST00000564480 COL11A2P13942 1736 aaPredicted RBP18.58■□□□□ 0.57
KNOP1-202ENST00000564480 TIAM2Q8IVF5 1701 aa18.58■□□□□ 0.57
KNOP1-202ENST00000564480 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
KNOP1-202ENST00000564480 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.56
KNOP1-202ENST00000564480 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
KNOP1-202ENST00000564480 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
KNOP1-202ENST00000564480 PDE6BP35913 854 aa18.57■□□□□ 0.56
KNOP1-202ENST00000564480 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
KNOP1-202ENST00000564480 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
KNOP1-202ENST00000564480 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
KNOP1-202ENST00000564480 CEMIPQ8WUJ3 1361 aa18.56■□□□□ 0.56
KNOP1-202ENST00000564480 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
KNOP1-202ENST00000564480 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
KNOP1-202ENST00000564480 TEX13AQ9BXU3 409 aaPredicted RBP18.56■□□□□ 0.56
KNOP1-202ENST00000564480 PCNTO95613 3336 aa18.56■□□□□ 0.56
KNOP1-202ENST00000564480 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
KNOP1-202ENST00000564480 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
KNOP1-202ENST00000564480 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
KNOP1-202ENST00000564480 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
KNOP1-202ENST00000564480 DDNO94850 711 aaPredicted RBP18.54■□□□□ 0.56
KNOP1-202ENST00000564480 SRGNP10124 158 aa18.54■□□□□ 0.56
KNOP1-202ENST00000564480 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
KNOP1-202ENST00000564480 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
KNOP1-202ENST00000564480 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
KNOP1-202ENST00000564480 CAPN15O75808 1086 aa18.53■□□□□ 0.56
KNOP1-202ENST00000564480 HSPA1AP0DMV8 641 aaKnown RBP18.53■□□□□ 0.56
KNOP1-202ENST00000564480 HSPA1BP0DMV9 641 aaKnown RBP18.53■□□□□ 0.56
KNOP1-202ENST00000564480 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
KNOP1-202ENST00000564480 DZIP3Q86Y13 1208 aaKnown RBP18.53■□□□□ 0.56
KNOP1-202ENST00000564480 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms