RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
CCNF-204ENST00000564333 SSH3Q8TE77 659 aa20.36■□□□□ 0.85
CCNF-204ENST00000564333 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
CCNF-204ENST00000564333 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
CCNF-204ENST00000564333 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
CCNF-204ENST00000564333 MX1P20591 662 aa20.35■□□□□ 0.85
CCNF-204ENST00000564333 CABLES1Q8TDN4 633 aa20.35■□□□□ 0.85
CCNF-204ENST00000564333 CSB-PGBD3P0DP91 1061 aa20.35■□□□□ 0.85
CCNF-204ENST00000564333 CPDO75976 1380 aa20.34■□□□□ 0.85
CCNF-204ENST00000564333 POLA2Q14181 598 aa20.34■□□□□ 0.85
CCNF-204ENST00000564333 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
CCNF-204ENST00000564333 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.85
CCNF-204ENST00000564333 PHKG2P15735 406 aa20.33■□□□□ 0.85
CCNF-204ENST00000564333 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
CCNF-204ENST00000564333 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.85
CCNF-204ENST00000564333 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.84
CCNF-204ENST00000564333 CHRNA2Q15822 529 aa20.33■□□□□ 0.84
CCNF-204ENST00000564333 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.84
CCNF-204ENST00000564333 USP26Q9BXU7 913 aa20.33■□□□□ 0.84
CCNF-204ENST00000564333 AK9Q5TCS8 1911 aa20.32■□□□□ 0.84
CCNF-204ENST00000564333 ABCA3Q99758 1704 aa20.32■□□□□ 0.84
CCNF-204ENST00000564333 CD2BP2O95400 341 aaKnown RBP20.32■□□□□ 0.84
CCNF-204ENST00000564333 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
CCNF-204ENST00000564333 SLC52A2Q9HAB3 445 aa20.32■□□□□ 0.84
CCNF-204ENST00000564333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCNF-204ENST00000564333 K7ELQ4 463 aaPredicted RBP20.31■□□□□ 0.84
CCNF-204ENST00000564333 REC8O95072 547 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 MAP3K2Q9Y2U5 619 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 AOX1Q06278 1338 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 ERC2O15083 957 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 DDIT3P35638 169 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 RABEP1Q15276 862 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 STAP2Q9UGK3 403 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
CCNF-204ENST00000564333 SRGAP3O43295 1099 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 ALDH1L1O75891 902 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 ZNF790Q6PG37 636 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
CCNF-204ENST00000564333 SURF6O75683 361 aaKnown RBP20.29■□□□□ 0.84
CCNF-204ENST00000564333 BRINP3Q76B58 766 aa20.29■□□□□ 0.84
CCNF-204ENST00000564333 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCNF-204ENST00000564333 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
CCNF-204ENST00000564333 IL1RAPL2Q9NP60 686 aa20.28■□□□□ 0.84
CCNF-204ENST00000564333 RTN4Q9NQC3 1192 aaKnown RBP20.27■□□□□ 0.84
CCNF-204ENST00000564333 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
CCNF-204ENST00000564333 GLI3P10071 1580 aa20.27■□□□□ 0.84
CCNF-204ENST00000564333 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
CCNF-204ENST00000564333 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
CCNF-204ENST00000564333 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
CCNF-204ENST00000564333 KIF1BPQ96EK5 621 aa20.26■□□□□ 0.83
CCNF-204ENST00000564333 TRIM6-TRIM34B2RNG4 842 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 MTX1Q13505 466 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 PDIA6Q15084 440 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 DCAF5Q96JK2 942 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
CCNF-204ENST00000564333 MCM4P33991 863 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
CCNF-204ENST00000564333 CYP27B1O15528 508 aa20.24■□□□□ 0.83
CCNF-204ENST00000564333 CWF19L2Q2TBE0 894 aaKnown RBP20.24■□□□□ 0.83
CCNF-204ENST00000564333 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
CCNF-204ENST00000564333 RILPL2Q969X0 211 aa20.24■□□□□ 0.83
CCNF-204ENST00000564333 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
CCNF-204ENST00000564333 LINS1Q8NG48 757 aa20.23■□□□□ 0.83
CCNF-204ENST00000564333 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
CCNF-204ENST00000564333 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
CCNF-204ENST00000564333 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
CCNF-204ENST00000564333 ARFGEF2Q9Y6D5 1785 aa20.22■□□□□ 0.83
CCNF-204ENST00000564333 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
CCNF-204ENST00000564333 CHMLP26374 656 aa20.22■□□□□ 0.83
CCNF-204ENST00000564333 TTC5Q8N0Z6 440 aa20.22■□□□□ 0.83
CCNF-204ENST00000564333 COL5A2P05997 1499 aaPredicted RBP20.22■□□□□ 0.83
CCNF-204ENST00000564333 ZNF496Q96IT1 587 aaPredicted RBP20.21■□□□□ 0.83
CCNF-204ENST00000564333 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
CCNF-204ENST00000564333 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 UTYO14607 1347 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 SOS2Q07890 1332 aaPredicted RBP20.21■□□□□ 0.83
CCNF-204ENST00000564333 SHANK3Q9BYB0 1731 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 GRM8O00222 908 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 PTMSP20962 102 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
CCNF-204ENST00000564333 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 PRDM11Q9NQV5 511 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 UBR2Q8IWV8 1755 aa20.21■□□□□ 0.83
CCNF-204ENST00000564333 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
CCNF-204ENST00000564333 PI4K2BQ8TCG2 481 aa20.2■□□□□ 0.82
CCNF-204ENST00000564333 PAPPAQ13219 1627 aa20.2■□□□□ 0.82
CCNF-204ENST00000564333 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
CCNF-204ENST00000564333 ST18O60284 1047 aa20.19■□□□□ 0.82
CCNF-204ENST00000564333 MYL6BP14649 208 aa20.19■□□□□ 0.82
CCNF-204ENST00000564333 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
CCNF-204ENST00000564333 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
CCNF-204ENST00000564333 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
CCNF-204ENST00000564333 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
CCNF-204ENST00000564333 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms