RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 MAP4K4O95819 1239 aaPredicted RBP14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 ZNF853P0CG23 659 aa14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 BMS1Q14692 1282 aaKnown RBP14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 KIF1BPQ96EK5 621 aa14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 STK26Q9P289 416 aa14.66□□□□□ -0.06
SCAMP2-204ENST00000563829 ERCC6LQ2NKX8 1250 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 RUFY3Q7L099 469 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 DACT1Q9NYF0 836 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 RAD50Q92878 1312 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 GOLGA6L4A6NEF3 574 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 SLU7O95391 586 aaKnown RBP14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 DNAJC25Q9H1X3 360 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 LIMCH1Q9UPQ0 1083 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 LARGE1O95461 756 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 SKILP12757 684 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 ZNF165P49910 485 aa14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
SCAMP2-204ENST00000563829 KIF24Q5T7B8 1368 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 FILIP1Q7Z7B0 1213 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 TTC6Q86TZ1 520 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 LRRC8AQ8IWT6 810 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 RSPH14Q9UHP6 348 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 INO80Q9ULG1 1556 aaPredicted RBP14.64□□□□□ -0.07
SCAMP2-204ENST00000563829 FAM135BQ49AJ0 1406 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 CCDC171Q6TFL3 1326 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 HSPA4P34932 840 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 F6X3S4 739 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 TERF2IPQ9NYB0 399 aa14.63□□□□□ -0.07
SCAMP2-204ENST00000563829 PLCH2O75038 1416 aa14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 HTATSF1O43719 755 aaKnown RBP14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 SNX14Q9Y5W7 946 aa14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 FHOD1Q9Y613 1164 aa14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
SCAMP2-204ENST00000563829 KRBA2Q6ZNG9 492 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 NYAP1Q6ZVC0 841 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 C10orf67Q8IYJ2 551 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 LRRN4CLQ8ND94 238 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 USP16Q9Y5T5 823 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 ERBB3P21860 1342 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 CASTP20810 708 aaKnown RBP14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 CLCN6P51797 869 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 KRT85P78386 507 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 KIF1BO60333 1816 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 PNMA6AP0CW24 399 aaPredicted RBP14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 FAM193AP78312 1265 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 TEX35Q5T0J7 233 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 SYT10Q6XYQ8 523 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 CREBRFQ8IUR6 639 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 TTC14Q96N46 770 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 TET3O43151 1660 aa14.61□□□□□ -0.07
SCAMP2-204ENST00000563829 GOLGA6L19H0YKK7 550 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 VGFO15240 615 aaPredicted RBP14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 TDRD7Q8NHU6 1098 aaKnown RBP14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 POLKQ9UBT6 870 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 MINK1Q8N4C8 1332 aaPredicted RBP14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 PLA2G4AP47712 749 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 NECAB1Q8N987 351 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 RASSF4Q9H2L5 321 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 IL1RAPL2Q9NP60 686 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 ZC3H13Q5T200 1668 aaKnown RBP14.6□□□□□ -0.07
SCAMP2-204ENST00000563829 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 TRIM66O15016 1216 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 ARHGAP29Q52LW3 1261 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 MROH2AA6NES4 1674 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 NRXN1Q9ULB1 1477 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 ST5P78524 1137 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
SCAMP2-204ENST00000563829 SSH2Q76I76 1423 aa14.58□□□□□ -0.07
SCAMP2-204ENST00000563829 H2AFXP16104 143 aaPredicted RBP14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 CCAR2Q8N163 923 aaKnown RBP14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 ZCCHC17Q9NP64 241 aaKnown RBP14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 NUTM1Q86Y26 1132 aa14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 BICD2Q8TD16 824 aa14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 LRRFIP2Q9Y608 721 aaKnown RBP14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 SALL3Q9BXA9 1300 aa14.58□□□□□ -0.08
SCAMP2-204ENST00000563829 SETBP1Q9Y6X0 1596 aa14.57□□□□□ -0.08
SCAMP2-204ENST00000563829 NR1I2O75469 434 aa14.57□□□□□ -0.08
SCAMP2-204ENST00000563829 GYS2P54840 703 aa14.57□□□□□ -0.08
SCAMP2-204ENST00000563829 LMOD3Q0VAK6 560 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms