RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 G2E3Q7L622 706 aa30.02■■■□□ 2.4
ZNF688-204ENST00000563665 ATG3Q9NT62 314 aa30.02■■■□□ 2.4
ZNF688-204ENST00000563665 CICQ96RK0 1608 aaPredicted RBP30.01■■■□□ 2.39
ZNF688-204ENST00000563665 VSIG10Q8N0Z9 540 aa30.01■■■□□ 2.39
ZNF688-204ENST00000563665 TMEM57Q8N5G2 664 aa30.01■■■□□ 2.39
ZNF688-204ENST00000563665 ASAP1Q9ULH1 1129 aa30.01■■■□□ 2.39
ZNF688-204ENST00000563665 SBF2Q86WG5 1849 aa30■■■□□ 2.39
ZNF688-204ENST00000563665 ERBB4Q15303 1308 aa30■■■□□ 2.39
ZNF688-204ENST00000563665 BRWD3Q6RI45 1802 aa29.99■■■□□ 2.39
ZNF688-204ENST00000563665 SEPT12Q8IYM1 358 aa29.99■■■□□ 2.39
ZNF688-204ENST00000563665 SYTL4Q96C24 671 aaPredicted RBP29.99■■■□□ 2.39
ZNF688-204ENST00000563665 DDX21Q9NR30 783 aaKnown RBP eCLIP29.99■■■□□ 2.39
ZNF688-204ENST00000563665 DDX19BQ9UMR2 479 aa29.99■■■□□ 2.39
ZNF688-204ENST00000563665 PXDNLA1KZ92 1463 aa29.99■■■□□ 2.39
ZNF688-204ENST00000563665 ITPRIPQ8IWB1 547 aa29.97■■■□□ 2.39
ZNF688-204ENST00000563665 HYPKQ9NX55 129 aa29.97■■■□□ 2.39
ZNF688-204ENST00000563665 USP16Q9Y5T5 823 aa29.97■■■□□ 2.39
ZNF688-204ENST00000563665 PTCD1O75127 700 aaKnown RBP29.96■■■□□ 2.39
ZNF688-204ENST00000563665 ZNF831Q5JPB2 1677 aa29.96■■■□□ 2.39
ZNF688-204ENST00000563665 TJP1Q07157 1748 aa29.96■■■□□ 2.39
ZNF688-204ENST00000563665 INTS3Q68E01 1043 aaKnown RBP29.96■■■□□ 2.39
ZNF688-204ENST00000563665 ACSBG1Q96GR2 724 aa29.96■■■□□ 2.39
ZNF688-204ENST00000563665 FKBP5Q13451 457 aaPredicted RBP29.95■■■□□ 2.38
ZNF688-204ENST00000563665 PDIA6Q15084 440 aa29.95■■■□□ 2.38
ZNF688-204ENST00000563665 CCDC136Q96JN2 1154 aa29.95■■■□□ 2.38
ZNF688-204ENST00000563665 TEX13AQ9BXU3 409 aaPredicted RBP29.95■■■□□ 2.38
ZNF688-204ENST00000563665 RBM6P78332 1123 aaKnown RBP29.94■■■□□ 2.38
ZNF688-204ENST00000563665 CHMP4BQ9H444 224 aaKnown RBP29.94■■■□□ 2.38
ZNF688-204ENST00000563665 PHAXQ9H814 394 aaKnown RBP29.94■■■□□ 2.38
ZNF688-204ENST00000563665 BTAF1O14981 1849 aa29.94■■■□□ 2.38
ZNF688-204ENST00000563665 B4GALNT3Q6L9W6 998 aa29.93■■■□□ 2.38
ZNF688-204ENST00000563665 PROSER3Q2NL68 480 aa29.92■■■□□ 2.38
ZNF688-204ENST00000563665 SMARCC1Q92922 1105 aaPredicted RBP29.91■■■□□ 2.38
ZNF688-204ENST00000563665 ANXA1P04083 346 aa29.89■■■□□ 2.38
ZNF688-204ENST00000563665 CCT4P50991 539 aaKnown RBP29.89■■■□□ 2.38
ZNF688-204ENST00000563665 LRP10Q7Z4F1 713 aa29.88■■■□□ 2.37
ZNF688-204ENST00000563665 RBM42Q9BTD8 480 aaKnown RBP29.88■■■□□ 2.37
ZNF688-204ENST00000563665 KCNQ2O43526 872 aa29.88■■■□□ 2.37
ZNF688-204ENST00000563665 F6X3S4 739 aa29.87■■■□□ 2.37
ZNF688-204ENST00000563665 ZBTB40Q9NUA8 1239 aa29.87■■■□□ 2.37
ZNF688-204ENST00000563665 PALLDQ8WX93 1383 aa29.86■■■□□ 2.37
ZNF688-204ENST00000563665 ADCY9O60503 1353 aa29.85■■■□□ 2.37
ZNF688-204ENST00000563665 ZBTB7BO15156 539 aaPredicted RBP29.85■■■□□ 2.37
ZNF688-204ENST00000563665 DDX58O95786 925 aaKnown RBP29.85■■■□□ 2.37
ZNF688-204ENST00000563665 DNAJC10Q8IXB1 793 aa29.85■■■□□ 2.37
ZNF688-204ENST00000563665 SLC4A9Q96Q91 983 aa29.85■■■□□ 2.37
ZNF688-204ENST00000563665 ATP10DQ9P241 1426 aa29.84■■■□□ 2.37
ZNF688-204ENST00000563665 RREB1Q92766 1687 aa29.84■■■□□ 2.37
ZNF688-204ENST00000563665 STARD3NLO95772 234 aa29.84■■■□□ 2.37
ZNF688-204ENST00000563665 COL5A3P25940 1745 aaPredicted RBP29.84■■■□□ 2.37
ZNF688-204ENST00000563665 KSR2Q6VAB6 950 aa29.83■■■□□ 2.37
ZNF688-204ENST00000563665 KRT27Q7Z3Y8 459 aa29.83■■■□□ 2.37
ZNF688-204ENST00000563665 DNAAF4Q8WXU2 420 aa29.83■■■□□ 2.37
ZNF688-204ENST00000563665 ARFGEF2Q9Y6D5 1785 aa29.83■■■□□ 2.37
ZNF688-204ENST00000563665 PI4KAP2A4QPH2 592 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 NBPF26B4DH59 902 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 MYL6BP14649 208 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 NBPF14Q5TI25 921 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 NBPF10Q6P3W6 841 aaKnown RBP29.82■■■□□ 2.36
ZNF688-204ENST00000563665 SLC4A10Q6U841 1118 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 NBPF15Q8N660 670 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 PI4KAP1Q8N8J0 262 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 LY75O60449 1722 aa29.82■■■□□ 2.36
ZNF688-204ENST00000563665 NUP188Q5SRE5 1749 aa29.81■■■□□ 2.36
ZNF688-204ENST00000563665 LOC102724428A0A0B4J2F2 783 aa29.8■■■□□ 2.36
ZNF688-204ENST00000563665 A1BGP04217 495 aa29.8■■■□□ 2.36
ZNF688-204ENST00000563665 SIK1P57059 783 aa29.8■■■□□ 2.36
ZNF688-204ENST00000563665 XAGE3Q8WTP9 111 aa29.8■■■□□ 2.36
ZNF688-204ENST00000563665 CYP19A1P11511 503 aaPredicted RBP29.79■■■□□ 2.36
ZNF688-204ENST00000563665 RXRBP28702 533 aa29.79■■■□□ 2.36
ZNF688-204ENST00000563665 FAM182BQ5T319 152 aa29.79■■■□□ 2.36
ZNF688-204ENST00000563665 FAM196AQ6ZSG2 479 aa29.79■■■□□ 2.36
ZNF688-204ENST00000563665 COPS6Q7L5N1 327 aa29.79■■■□□ 2.36
ZNF688-204ENST00000563665 RGS17Q9UGC6 210 aaPredicted RBP29.78■■■□□ 2.36
ZNF688-204ENST00000563665 PCDHB15Q9Y5E8 787 aa29.78■■■□□ 2.36
ZNF688-204ENST00000563665 IBTKQ9P2D0 1353 aaPredicted RBP29.78■■■□□ 2.36
ZNF688-204ENST00000563665 MAP3K2Q9Y2U5 619 aa29.77■■■□□ 2.36
ZNF688-204ENST00000563665 KDM2BQ8NHM5 1336 aa29.76■■■□□ 2.36
ZNF688-204ENST00000563665 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.35
ZNF688-204ENST00000563665 AIMP1Q12904 312 aaKnown RBP29.76■■■□□ 2.35
ZNF688-204ENST00000563665 BEND3Q5T5X7 828 aa29.76■■■□□ 2.35
ZNF688-204ENST00000563665 SRCIN1Q9C0H9 1055 aa29.76■■■□□ 2.35
ZNF688-204ENST00000563665 ATP6V1AP38606 617 aa29.75■■■□□ 2.35
ZNF688-204ENST00000563665 BCL11BQ9C0K0 894 aaPredicted RBP29.75■■■□□ 2.35
ZNF688-204ENST00000563665 CENPQQ7L2Z9 268 aaPredicted RBP29.74■■■□□ 2.35
ZNF688-204ENST00000563665 ANKRD13DQ6ZTN6 518 aa29.73■■■□□ 2.35
ZNF688-204ENST00000563665 PTF1AQ7RTS3 328 aa29.73■■■□□ 2.35
ZNF688-204ENST00000563665 RIC3Q7Z5B4 369 aa29.73■■■□□ 2.35
ZNF688-204ENST00000563665 MYH14Q7Z406 1995 aaKnown RBP29.73■■■□□ 2.35
ZNF688-204ENST00000563665 ALDH1L1O75891 902 aa29.72■■■□□ 2.35
ZNF688-204ENST00000563665 PLBD2Q8NHP8 589 aa29.72■■■□□ 2.35
ZNF688-204ENST00000563665 AFDNP55196 1824 aaKnown RBP29.72■■■□□ 2.35
ZNF688-204ENST00000563665 TAF1LQ8IZX4 1826 aa29.72■■■□□ 2.35
ZNF688-204ENST00000563665 MEIS3Q99687 375 aa29.71■■■□□ 2.35
ZNF688-204ENST00000563665 GNAI3P08754 354 aa29.71■■■□□ 2.35
ZNF688-204ENST00000563665 ITPK1Q13572 414 aa29.71■■■□□ 2.35
ZNF688-204ENST00000563665 LINS1Q8NG48 757 aa29.71■■■□□ 2.35
ZNF688-204ENST00000563665 METTL22Q9BUU2 404 aaPredicted RBP29.71■■■□□ 2.35
ZNF688-204ENST00000563665 HDAC1Q13547 482 aaPredicted RBP29.7■■■□□ 2.34
ZNF688-204ENST00000563665 POTEAQ6S8J7 498 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms