RNA–Protein interactions for RNA: ENST00000563505.5

STUB1-202, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 894 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-202ENST00000563505 DDX10Q13206 875 aaKnown RBP32.22■■■□□ 2.75
STUB1-202ENST00000563505 PARP3Q9Y6F1 533 aa32.22■■■□□ 2.75
STUB1-202ENST00000563505 C10orf71Q711Q0 1435 aa32.21■■■□□ 2.75
STUB1-202ENST00000563505 KCNQ3O43525 872 aa32.21■■■□□ 2.75
STUB1-202ENST00000563505 N4BP2Q86UW6 1770 aaPredicted RBP32.21■■■□□ 2.75
STUB1-202ENST00000563505 KIAA1551Q9HCM1 1747 aa32.2■■■□□ 2.75
STUB1-202ENST00000563505 BTBD11A6QL63 1104 aa32.2■■■□□ 2.75
STUB1-202ENST00000563505 HTATSF1O43719 755 aaKnown RBP32.2■■■□□ 2.75
STUB1-202ENST00000563505 STARD3NLO95772 234 aa32.2■■■□□ 2.75
STUB1-202ENST00000563505 RALBP1Q15311 655 aa32.2■■■□□ 2.75
STUB1-202ENST00000563505 MCM10Q7L590 875 aa32.2■■■□□ 2.75
STUB1-202ENST00000563505 TM4SF1P30408 202 aa32.19■■■□□ 2.74
STUB1-202ENST00000563505 DDR1Q08345 913 aa32.19■■■□□ 2.74
STUB1-202ENST00000563505 USPL1Q5W0Q7 1092 aa32.19■■■□□ 2.74
STUB1-202ENST00000563505 RTF1Q92541 710 aaKnown RBP32.19■■■□□ 2.74
STUB1-202ENST00000563505 TEX13AQ9BXU3 409 aaPredicted RBP32.19■■■□□ 2.74
STUB1-202ENST00000563505 NARFQ9UHQ1 456 aa32.19■■■□□ 2.74
STUB1-202ENST00000563505 ZPR1O75312 459 aa32.18■■■□□ 2.74
STUB1-202ENST00000563505 FMNL2Q96PY5 1086 aa32.18■■■□□ 2.74
STUB1-202ENST00000563505 PLEKHF1Q96S99 279 aa32.18■■■□□ 2.74
STUB1-202ENST00000563505 A0A0G2JLW4 131 aa32.17■■■□□ 2.74
STUB1-202ENST00000563505 DCTN1Q14203 1278 aa32.17■■■□□ 2.74
STUB1-202ENST00000563505 COL15A1P39059 1388 aa32.17■■■□□ 2.74
STUB1-202ENST00000563505 CANXP27824 592 aaKnown RBP32.16■■■□□ 2.74
STUB1-202ENST00000563505 EIF5P55010 431 aaKnown RBP32.16■■■□□ 2.74
STUB1-202ENST00000563505 ZNF526Q8TF50 670 aaPredicted RBP32.15■■■□□ 2.74
STUB1-202ENST00000563505 BCL2L12Q9HB09 334 aa32.15■■■□□ 2.74
STUB1-202ENST00000563505 BCS1LQ9Y276 419 aa32.15■■■□□ 2.74
STUB1-202ENST00000563505 POLRMTO00411 1230 aaKnown RBP32.13■■■□□ 2.73
STUB1-202ENST00000563505 DPEP1P16444 411 aa32.12■■■□□ 2.73
STUB1-202ENST00000563505 BRCA1P38398 1863 aaKnown RBP32.1■■■□□ 2.73
STUB1-202ENST00000563505 NEFMP07197 916 aa32.09■■■□□ 2.73
STUB1-202ENST00000563505 NFIXQ14938 502 aa32.09■■■□□ 2.73
STUB1-202ENST00000563505 A0A087WZG4 1122 aa32.08■■■□□ 2.73
STUB1-202ENST00000563505 A1BGP04217 495 aa32.08■■■□□ 2.73
STUB1-202ENST00000563505 KCNA3P22001 575 aa32.08■■■□□ 2.73
STUB1-202ENST00000563505 IL6STP40189 918 aaPredicted RBP32.08■■■□□ 2.73
STUB1-202ENST00000563505 TAF7Q15545 349 aaPredicted RBP32.08■■■□□ 2.73
STUB1-202ENST00000563505 USP16Q9Y5T5 823 aa32.08■■■□□ 2.73
STUB1-202ENST00000563505 NFE2L2Q16236 605 aa32.07■■■□□ 2.72
STUB1-202ENST00000563505 PNNQ9H307 717 aaKnown RBP32.07■■■□□ 2.72
STUB1-202ENST00000563505 ARHGAP27Q6ZUM4 889 aa32.06■■■□□ 2.72
STUB1-202ENST00000563505 PRAMEF22A3QJZ6 481 aa32.05■■■□□ 2.72
STUB1-202ENST00000563505 PIM2Q9P1W9 311 aa32.05■■■□□ 2.72
STUB1-202ENST00000563505 ARFGEF1Q9Y6D6 1849 aa32.05■■■□□ 2.72
STUB1-202ENST00000563505 SNRPA1P09661 255 aaKnown RBP32.04■■■□□ 2.72
STUB1-202ENST00000563505 MYBBP1AQ9BQG0 1328 aaKnown RBP32.03■■■□□ 2.72
STUB1-202ENST00000563505 MIS18AQ9NYP9 233 aa32.02■■■□□ 2.72
STUB1-202ENST00000563505 TBC1D2BQ9UPU7 963 aa32.02■■■□□ 2.72
STUB1-202ENST00000563505 SERPINB2P05120 415 aa32■■■□□ 2.71
STUB1-202ENST00000563505 MAPK8IP3Q9UPT6 1336 aa32■■■□□ 2.71
STUB1-202ENST00000563505 KIF3CO14782 793 aa31.99■■■□□ 2.71
STUB1-202ENST00000563505 DALRD3Q5D0E6 543 aaKnown RBP31.99■■■□□ 2.71
STUB1-202ENST00000563505 ZNF330Q9Y3S2 320 aaPredicted RBP31.99■■■□□ 2.71
STUB1-202ENST00000563505 HSPA6P17066 643 aa31.98■■■□□ 2.71
STUB1-202ENST00000563505 PNISRQ8TF01 805 aaKnown RBP31.98■■■□□ 2.71
STUB1-202ENST00000563505 THUMPD2Q9BTF0 503 aaKnown RBP31.98■■■□□ 2.71
STUB1-202ENST00000563505 DLG5Q8TDM6 1919 aa31.97■■■□□ 2.71
STUB1-202ENST00000563505 CAMTA2O94983 1202 aa31.97■■■□□ 2.71
STUB1-202ENST00000563505 CHRNA5P30532 468 aa31.97■■■□□ 2.71
STUB1-202ENST00000563505 TBC1D9BQ66K14 1250 aa31.97■■■□□ 2.71
STUB1-202ENST00000563505 PIP4K2AP48426 406 aaPredicted RBP31.96■■■□□ 2.71
STUB1-202ENST00000563505 NRXN2Q9P2S2 1712 aa31.95■■■□□ 2.71
STUB1-202ENST00000563505 BICDL1Q6ZP65 573 aa31.95■■■□□ 2.71
STUB1-202ENST00000563505 NBPF26B4DH59 902 aa31.94■■■□□ 2.7
STUB1-202ENST00000563505 NBPF10Q6P3W6 841 aaKnown RBP31.94■■■□□ 2.7
STUB1-202ENST00000563505 NBPF15Q8N660 670 aa31.94■■■□□ 2.7
STUB1-202ENST00000563505 NPM2Q86SE8 214 aaKnown RBP31.93■■■□□ 2.7
STUB1-202ENST00000563505 DZIP3Q86Y13 1208 aaKnown RBP31.93■■■□□ 2.7
STUB1-202ENST00000563505 AFDNP55196 1824 aaKnown RBP31.93■■■□□ 2.7
STUB1-202ENST00000563505 PRKRIP1Q9H875 184 aaPredicted RBP31.92■■■□□ 2.7
STUB1-202ENST00000563505 RIPK4P57078 832 aa31.91■■■□□ 2.7
STUB1-202ENST00000563505 EIF4A1P60842 406 aaKnown RBP31.91■■■□□ 2.7
STUB1-202ENST00000563505 C9orf131Q5VYM1 1079 aa31.91■■■□□ 2.7
STUB1-202ENST00000563505 CEP350Q5VT06 3117 aa31.9■■■□□ 2.7
STUB1-202ENST00000563505 TMPOP42166 694 aaKnown RBP31.9■■■□□ 2.7
STUB1-202ENST00000563505 SCN7AQ01118 1682 aa31.89■■■□□ 2.7
STUB1-202ENST00000563505 CARMIL3Q8ND23 1372 aa31.88■■■□□ 2.69
STUB1-202ENST00000563505 TOMM70O94826 608 aa31.87■■■□□ 2.69
STUB1-202ENST00000563505 ZEB1P37275 1124 aaPredicted RBP31.86■■■□□ 2.69
STUB1-202ENST00000563505 CLEC4GQ6UXB4 293 aa31.86■■■□□ 2.69
STUB1-202ENST00000563505 SETDB2Q96T68 719 aa31.86■■■□□ 2.69
STUB1-202ENST00000563505 KDM3BQ7LBC6 1761 aa31.86■■■□□ 2.69
STUB1-202ENST00000563505 PRR5LQ6MZQ0 368 aa31.85■■■□□ 2.69
STUB1-202ENST00000563505 CCDC146Q8IYE0 955 aa31.84■■■□□ 2.69
STUB1-202ENST00000563505 ADAMTS8Q9UP79 889 aa31.84■■■□□ 2.69
STUB1-202ENST00000563505 SBF1O95248 1867 aa31.84■■■□□ 2.69
STUB1-202ENST00000563505 RGL2O15211 777 aa31.83■■■□□ 2.69
STUB1-202ENST00000563505 C2CD5Q86YS7 1000 aa31.83■■■□□ 2.69
STUB1-202ENST00000563505 BRIP1Q9BX63 1249 aa31.83■■■□□ 2.69
STUB1-202ENST00000563505 NMRK2Q9NPI5 230 aa31.83■■■□□ 2.69
STUB1-202ENST00000563505 RNF181Q9P0P0 153 aa31.83■■■□□ 2.69
STUB1-202ENST00000563505 WDR43Q15061 677 aaKnown RBP eCLIP31.82■■■□□ 2.68
STUB1-202ENST00000563505 RUNDC1Q96C34 613 aa31.82■■■□□ 2.68
STUB1-202ENST00000563505 DLEC1Q9Y238 1755 aa31.81■■■□□ 2.68
STUB1-202ENST00000563505 H0YIN7 160 aa31.81■■■□□ 2.68
STUB1-202ENST00000563505 LMOD3Q0VAK6 560 aa31.81■■■□□ 2.68
STUB1-202ENST00000563505 CCDC24Q8N4L8 307 aa31.81■■■□□ 2.68
STUB1-202ENST00000563505 BABAM1Q9NWV8 329 aa31.81■■■□□ 2.68
STUB1-202ENST00000563505 RRP7AQ9Y3A4 280 aaKnown RBP31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms