RNA–Protein interactions for RNA: ENST00000563115.5

POLR2C-204, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-204ENST00000563115 TTC5Q8N0Z6 440 aa23.71■■□□□ 1.39
POLR2C-204ENST00000563115 ZPR1O75312 459 aa23.7■■□□□ 1.38
POLR2C-204ENST00000563115 TM4SF1P30408 202 aa23.7■■□□□ 1.38
POLR2C-204ENST00000563115 ZNF496Q96IT1 587 aaPredicted RBP23.7■■□□□ 1.38
POLR2C-204ENST00000563115 NUDCQ9Y266 331 aa23.7■■□□□ 1.38
POLR2C-204ENST00000563115 POLRMTO00411 1230 aaKnown RBP23.69■■□□□ 1.38
POLR2C-204ENST00000563115 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
POLR2C-204ENST00000563115 NARFQ9UHQ1 456 aa23.69■■□□□ 1.38
POLR2C-204ENST00000563115 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
POLR2C-204ENST00000563115 KCNA3P22001 575 aa23.68■■□□□ 1.38
POLR2C-204ENST00000563115 HEG1Q9ULI3 1381 aa23.67■■□□□ 1.38
POLR2C-204ENST00000563115 U2AF1L5P0DN76 240 aaPredicted RBP23.67■■□□□ 1.38
POLR2C-204ENST00000563115 U2AF1Q01081 240 aaKnown RBP eCLIP23.67■■□□□ 1.38
POLR2C-204ENST00000563115 BCL2L12Q9HB09 334 aa23.66■■□□□ 1.38
POLR2C-204ENST00000563115 STARD3NLO95772 234 aa23.65■■□□□ 1.38
POLR2C-204ENST00000563115 CANXP27824 592 aaKnown RBP23.65■■□□□ 1.38
POLR2C-204ENST00000563115 NFIXQ14938 502 aa23.65■■□□□ 1.38
POLR2C-204ENST00000563115 AFDNP55196 1824 aaKnown RBP23.65■■□□□ 1.38
POLR2C-204ENST00000563115 ARFGEF1Q9Y6D6 1849 aa23.65■■□□□ 1.38
POLR2C-204ENST00000563115 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.37
POLR2C-204ENST00000563115 NRXN2Q9P2S2 1712 aa23.64■■□□□ 1.37
POLR2C-204ENST00000563115 KCNQ3O43525 872 aa23.63■■□□□ 1.37
POLR2C-204ENST00000563115 FCHSD2O94868 740 aa23.63■■□□□ 1.37
POLR2C-204ENST00000563115 GPBP1L1Q9HC44 474 aaPredicted RBP23.63■■□□□ 1.37
POLR2C-204ENST00000563115 SENP3-EIF4A1A0A087X0R7 540 aa23.62■■□□□ 1.37
POLR2C-204ENST00000563115 ZNF526Q8TF50 670 aaPredicted RBP23.62■■□□□ 1.37
POLR2C-204ENST00000563115 FMNL2Q96PY5 1086 aa23.62■■□□□ 1.37
POLR2C-204ENST00000563115 TEX13AQ9BXU3 409 aaPredicted RBP23.62■■□□□ 1.37
POLR2C-204ENST00000563115 BTBD11A6QL63 1104 aa23.61■■□□□ 1.37
POLR2C-204ENST00000563115 CHRNA5P30532 468 aa23.61■■□□□ 1.37
POLR2C-204ENST00000563115 PIM2Q9P1W9 311 aa23.61■■□□□ 1.37
POLR2C-204ENST00000563115 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
POLR2C-204ENST00000563115 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
POLR2C-204ENST00000563115 MCM10Q7L590 875 aa23.6■■□□□ 1.37
POLR2C-204ENST00000563115 A0A087WZG4 1122 aa23.59■■□□□ 1.37
POLR2C-204ENST00000563115 DALRD3Q5D0E6 543 aaKnown RBP23.58■■□□□ 1.37
POLR2C-204ENST00000563115 SERPINB2P05120 415 aa23.57■■□□□ 1.36
POLR2C-204ENST00000563115 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
POLR2C-204ENST00000563115 DLEC1Q9Y238 1755 aa23.56■■□□□ 1.36
POLR2C-204ENST00000563115 A1BGP04217 495 aa23.56■■□□□ 1.36
POLR2C-204ENST00000563115 IL6STP40189 918 aaPredicted RBP23.56■■□□□ 1.36
POLR2C-204ENST00000563115 DCTN1Q14203 1278 aa23.56■■□□□ 1.36
POLR2C-204ENST00000563115 CARMIL3Q8ND23 1372 aa23.55■■□□□ 1.36
POLR2C-204ENST00000563115 TBC1D2BQ9UPU7 963 aa23.55■■□□□ 1.36
POLR2C-204ENST00000563115 ZNF330Q9Y3S2 320 aaPredicted RBP23.55■■□□□ 1.36
POLR2C-204ENST00000563115 HTATSF1O43719 755 aaKnown RBP23.54■■□□□ 1.36
POLR2C-204ENST00000563115 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
POLR2C-204ENST00000563115 DLG5Q8TDM6 1919 aa23.53■■□□□ 1.36
POLR2C-204ENST00000563115 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
POLR2C-204ENST00000563115 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
POLR2C-204ENST00000563115 USP16Q9Y5T5 823 aa23.53■■□□□ 1.36
POLR2C-204ENST00000563115 BCORQ6W2J9 1755 aa23.52■■□□□ 1.36
POLR2C-204ENST00000563115 KIF3CO14782 793 aa23.52■■□□□ 1.36
POLR2C-204ENST00000563115 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
POLR2C-204ENST00000563115 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
POLR2C-204ENST00000563115 PIP4K2AP48426 406 aaPredicted RBP23.5■■□□□ 1.35
POLR2C-204ENST00000563115 C9orf131Q5VYM1 1079 aa23.5■■□□□ 1.35
POLR2C-204ENST00000563115 PLEKHF1Q96S99 279 aa23.5■■□□□ 1.35
POLR2C-204ENST00000563115 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
POLR2C-204ENST00000563115 SBF1O95248 1867 aa23.49■■□□□ 1.35
POLR2C-204ENST00000563115 C2CD5Q86YS7 1000 aa23.48■■□□□ 1.35
POLR2C-204ENST00000563115 CEP350Q5VT06 3117 aa23.48■■□□□ 1.35
POLR2C-204ENST00000563115 TAF7Q15545 349 aaPredicted RBP23.47■■□□□ 1.35
POLR2C-204ENST00000563115 PRR5LQ6MZQ0 368 aa23.47■■□□□ 1.35
POLR2C-204ENST00000563115 NPM2Q86SE8 214 aaKnown RBP23.47■■□□□ 1.35
POLR2C-204ENST00000563115 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
POLR2C-204ENST00000563115 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
POLR2C-204ENST00000563115 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
POLR2C-204ENST00000563115 NEFMP07197 916 aa23.46■■□□□ 1.35
POLR2C-204ENST00000563115 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
POLR2C-204ENST00000563115 LAMB4A4D0S4 1761 aa23.45■■□□□ 1.34
POLR2C-204ENST00000563115 NBPF26B4DH59 902 aa23.45■■□□□ 1.34
POLR2C-204ENST00000563115 NBPF10Q6P3W6 841 aaKnown RBP23.45■■□□□ 1.34
POLR2C-204ENST00000563115 NBPF15Q8N660 670 aa23.45■■□□□ 1.34
POLR2C-204ENST00000563115 TTLL6Q8N841 843 aa23.45■■□□□ 1.34
POLR2C-204ENST00000563115 RNF181Q9P0P0 153 aa23.45■■□□□ 1.34
POLR2C-204ENST00000563115 H0YIN7 160 aa23.44■■□□□ 1.34
POLR2C-204ENST00000563115 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
POLR2C-204ENST00000563115 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
POLR2C-204ENST00000563115 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
POLR2C-204ENST00000563115 RASSF7Q02833 373 aa23.43■■□□□ 1.34
POLR2C-204ENST00000563115 SETDB2Q96T68 719 aa23.43■■□□□ 1.34
POLR2C-204ENST00000563115 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
POLR2C-204ENST00000563115 RALBP1Q15311 655 aa23.42■■□□□ 1.34
POLR2C-204ENST00000563115 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
POLR2C-204ENST00000563115 HSPA6P17066 643 aa23.41■■□□□ 1.34
POLR2C-204ENST00000563115 PDE6BP35913 854 aa23.41■■□□□ 1.34
POLR2C-204ENST00000563115 CNBD1Q8NA66 436 aa23.41■■□□□ 1.34
POLR2C-204ENST00000563115 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
POLR2C-204ENST00000563115 PRELPP51888 382 aa23.4■■□□□ 1.34
POLR2C-204ENST00000563115 CLEC4GQ6UXB4 293 aa23.4■■□□□ 1.34
POLR2C-204ENST00000563115 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
POLR2C-204ENST00000563115 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
POLR2C-204ENST00000563115 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
POLR2C-204ENST00000563115 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
POLR2C-204ENST00000563115 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
POLR2C-204ENST00000563115 NFKBIEO00221 500 aa23.37■■□□□ 1.33
POLR2C-204ENST00000563115 RGL2O15211 777 aa23.37■■□□□ 1.33
POLR2C-204ENST00000563115 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
POLR2C-204ENST00000563115 ZNF652Q9Y2D9 606 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms