RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TXLNBQ8N3L3 684 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 TEKT1Q969V4 418 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 DHRS1Q96LJ7 313 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 UNC45AQ9H3U1 944 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 GNL3LQ9NVN8 582 aaKnown RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 MAGEA10P43363 369 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 ARMC9Q7Z3E5 817 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 EFCAB13Q8IY85 973 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 SEZ6LQ9BYH1 1024 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 TRIM6Q9C030 488 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 GABBR1Q9UBS5 961 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 V9GYY5 206 aaPredicted RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 SASH1O94885 1247 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 MYCLP1P12525 358 aaPredicted RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 ABCF2Q9UG63 623 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 MNAT1P51948 309 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 RBM12BQ8IXT5 1001 aaKnown RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 MTRQ99707 1265 aa11.06□□□□□ -0.64
CDH1-205ENST00000562836 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 LRRFIP2Q9Y608 721 aaKnown RBP11.06□□□□□ -0.64
CDH1-205ENST00000562836 MYL1P05976 194 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 KCNA2P16389 499 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 PEX19P40855 299 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 FXNQ16595 210 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 BIVM-ERCC5R4GMW8 1640 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
CDH1-205ENST00000562836 MYO1BO43795 1136 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 C3orf20Q8ND61 904 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 C21orf2O43822 256 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 DBN1Q16643 649 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 PREPLQ4J6C6 727 aaPredicted RBP11.05□□□□□ -0.64
CDH1-205ENST00000562836 KANK4Q5T7N3 995 aaPredicted RBP11.05□□□□□ -0.64
CDH1-205ENST00000562836 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
CDH1-205ENST00000562836 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
CDH1-205ENST00000562836 ATAD2BQ9ULI0 1458 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
CDH1-205ENST00000562836 VCAM1P19320 739 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 PHACTR1Q9C0D0 580 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 KANK1Q14678 1352 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 CFAP69A5D8W1 941 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 GJA8P48165 433 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 SPATA7Q9P0W8 599 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
CDH1-205ENST00000562836 BOLA2-SMG1P6H3BVE0 249 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 TGFB3P10600 412 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 STIP1P31948 543 aaKnown RBP11.03□□□□□ -0.64
CDH1-205ENST00000562836 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 PTK7Q13308 1070 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 SNRNP27Q8WVK2 155 aaKnown RBP11.03□□□□□ -0.64
CDH1-205ENST00000562836 PPM1EQ8WY54 764 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 BAG1Q99933 345 aaPredicted RBP11.03□□□□□ -0.64
CDH1-205ENST00000562836 UBAP1Q9NZ09 502 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
CDH1-205ENST00000562836 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 CYP11B2P19099 503 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 RABEP1Q15276 862 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 HSP90B2PQ58FF3 399 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 LEKR1Q6ZMV7 388 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 KLF15Q9UIH9 416 aa11.03□□□□□ -0.64
CDH1-205ENST00000562836 FBXW7Q969H0 707 aa11.02□□□□□ -0.64
CDH1-205ENST00000562836 POLR3CQ9BUI4 534 aaPredicted RBP11.02□□□□□ -0.64
CDH1-205ENST00000562836 ELF1P32519 619 aa11.02□□□□□ -0.65
CDH1-205ENST00000562836 RDXP35241 583 aaKnown RBP11.02□□□□□ -0.65
CDH1-205ENST00000562836 RANBP1P43487 201 aa11.02□□□□□ -0.65
CDH1-205ENST00000562836 C11orf96Q7Z7L8 435 aa11.02□□□□□ -0.65
CDH1-205ENST00000562836 C17orf53Q8N3J3 647 aaPredicted RBP11.02□□□□□ -0.65
CDH1-205ENST00000562836 SMG6Q86US8 1419 aaKnown RBP11.02□□□□□ -0.65
CDH1-205ENST00000562836 PECAM1P16284 738 aaPredicted RBP11.01□□□□□ -0.65
CDH1-205ENST00000562836 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
CDH1-205ENST00000562836 C20orf194Q5TEA3 1177 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 FAM81BQ96LP2 452 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 SRRTQ9BXP5 876 aaKnown RBP11.01□□□□□ -0.65
CDH1-205ENST00000562836 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 KRT38O76015 456 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 COPB2P35606 906 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 PDIA5Q14554 519 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms