RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 GLI3P10071 1580 aa10□□□□□ -0.81
SNX29-201ENST00000562510 KIF1AQ12756 1690 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 PTGDRQ13258 359 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 WNT2BQ93097 391 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 TNS3Q68CZ2 1445 aa9.99□□□□□ -0.81
SNX29-201ENST00000562510 SMG6Q86US8 1419 aaKnown RBP9.99□□□□□ -0.81
SNX29-201ENST00000562510 LRP5O75197 1615 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 SMAPO00193 183 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
SNX29-201ENST00000562510 FAM198AQ9UFP1 575 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 PIK3C2AO00443 1686 aa9.98□□□□□ -0.81
SNX29-201ENST00000562510 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
SNX29-201ENST00000562510 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.97□□□□□ -0.81
SNX29-201ENST00000562510 A0A0G2JS52 829 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 DIAPH1O60610 1272 aaKnown RBP9.97□□□□□ -0.81
SNX29-201ENST00000562510 MYT1Q01538 1121 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
SNX29-201ENST00000562510 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
SNX29-201ENST00000562510 NUTM2GQ5VZR2 741 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 ANKK1Q8NFD2 765 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 NUDCQ9Y266 331 aa9.97□□□□□ -0.81
SNX29-201ENST00000562510 PPM1GO15355 546 aaPredicted RBP9.96□□□□□ -0.82
SNX29-201ENST00000562510 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
SNX29-201ENST00000562510 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 TATDN2Q93075 761 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 BTG4Q9NY30 223 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
SNX29-201ENST00000562510 PTPN5P54829 565 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 KCNH5Q8NCM2 988 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 MAP3K19Q56UN5 1328 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 SPATA31A5Q5VU36 1347 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 SPATA31A7Q8IWB4 1347 aa9.95□□□□□ -0.82
SNX29-201ENST00000562510 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
SNX29-201ENST00000562510 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
SNX29-201ENST00000562510 USP19O94966 1318 aa9.94□□□□□ -0.82
SNX29-201ENST00000562510 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
SNX29-201ENST00000562510 IL13P35225 146 aa9.94□□□□□ -0.82
SNX29-201ENST00000562510 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX29-201ENST00000562510 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
SNX29-201ENST00000562510 MAP2P11137 1827 aaKnown RBP9.93□□□□□ -0.82
SNX29-201ENST00000562510 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
SNX29-201ENST00000562510 FAM196AQ6ZSG2 479 aa9.93□□□□□ -0.82
SNX29-201ENST00000562510 CCDC146Q8IYE0 955 aa9.93□□□□□ -0.82
SNX29-201ENST00000562510 CAMKK2Q96RR4 588 aa9.93□□□□□ -0.82
SNX29-201ENST00000562510 HCSTQ9UBK5 93 aa9.93□□□□□ -0.82
SNX29-201ENST00000562510 MARF1Q9Y4F3 1742 aaKnown RBP9.93□□□□□ -0.82
SNX29-201ENST00000562510 FLT4P35916 1363 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 C3orf80F5H4A9 247 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 GCP02774 474 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 AMPHP49418 695 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
SNX29-201ENST00000562510 HIC1Q14526 733 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 THSD4Q6ZMP0 1018 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 SLIT3O75094 1523 aa9.92□□□□□ -0.82
SNX29-201ENST00000562510 ALS2Q96Q42 1657 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 APAF1O14727 1248 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 YY1P25490 414 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 HOXC9P31274 260 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 EZH2Q15910 746 aaKnown RBP9.91□□□□□ -0.82
SNX29-201ENST00000562510 ARHGEF25Q86VW2 580 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 IP6K1Q92551 441 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
SNX29-201ENST00000562510 NFAT5O94916 1531 aa9.91□□□□□ -0.82
SNX29-201ENST00000562510 BCAMP50895 628 aa9.9□□□□□ -0.82
SNX29-201ENST00000562510 FAM182BQ5T319 152 aa9.9□□□□□ -0.82
SNX29-201ENST00000562510 LRCH3Q96II8 777 aa9.9□□□□□ -0.82
SNX29-201ENST00000562510 PLEKHF1Q96S99 279 aa9.9□□□□□ -0.82
SNX29-201ENST00000562510 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
SNX29-201ENST00000562510 PEAK1Q9H792 1746 aa9.9□□□□□ -0.83
SNX29-201ENST00000562510 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 SPATA31A1Q5TZJ5 1347 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 GNPATO15228 680 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 TRIM37O94972 964 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 APBA3O96018 575 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
SNX29-201ENST00000562510 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
SNX29-201ENST00000562510 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
SNX29-201ENST00000562510 ZNF521Q96K83 1311 aa9.88□□□□□ -0.83
SNX29-201ENST00000562510 NWD2Q9ULI1 1742 aa9.88□□□□□ -0.83
SNX29-201ENST00000562510 RNF40O75150 1001 aa9.88□□□□□ -0.83
SNX29-201ENST00000562510 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
SNX29-201ENST00000562510 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms