RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
COMMD4-205ENST00000562310 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
COMMD4-205ENST00000562310 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-205ENST00000562310 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
COMMD4-205ENST00000562310 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-205ENST00000562310 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.48
COMMD4-205ENST00000562310 G2E3Q7L622 706 aa18.08■□□□□ 0.48
COMMD4-205ENST00000562310 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-205ENST00000562310 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-205ENST00000562310 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
COMMD4-205ENST00000562310 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
COMMD4-205ENST00000562310 CENPQQ7L2Z9 268 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-205ENST00000562310 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
COMMD4-205ENST00000562310 PIGBQ92521 554 aa18.07■□□□□ 0.48
COMMD4-205ENST00000562310 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
COMMD4-205ENST00000562310 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-205ENST00000562310 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
COMMD4-205ENST00000562310 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
COMMD4-205ENST00000562310 KDM2BQ8NHM5 1336 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 TJP1Q07157 1748 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 A0A0G2JS52 829 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
COMMD4-205ENST00000562310 MYT1Q01538 1121 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
COMMD4-205ENST00000562310 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-205ENST00000562310 ONECUT3O60422 494 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-205ENST00000562310 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
COMMD4-205ENST00000562310 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
COMMD4-205ENST00000562310 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
COMMD4-205ENST00000562310 PDIA6Q15084 440 aa18.02■□□□□ 0.48
COMMD4-205ENST00000562310 SYTL4Q96C24 671 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-205ENST00000562310 PTCD1O75127 700 aaKnown RBP18.01■□□□□ 0.47
COMMD4-205ENST00000562310 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
COMMD4-205ENST00000562310 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-205ENST00000562310 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
COMMD4-205ENST00000562310 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
COMMD4-205ENST00000562310 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
COMMD4-205ENST00000562310 F6X3S4 739 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 PROSER3Q2NL68 480 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 ZNF772Q68DY9 489 aaPredicted RBP18■□□□□ 0.47
COMMD4-205ENST00000562310 DNAAF4Q8WXU2 420 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
COMMD4-205ENST00000562310 QTRT2Q9H974 415 aaKnown RBP18■□□□□ 0.47
COMMD4-205ENST00000562310 PCDHB15Q9Y5E8 787 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 ADCY9O60503 1353 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
COMMD4-205ENST00000562310 SBF2Q86WG5 1849 aa18■□□□□ 0.47
COMMD4-205ENST00000562310 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
COMMD4-205ENST00000562310 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-205ENST00000562310 KSR2Q6VAB6 950 aa17.99■□□□□ 0.47
COMMD4-205ENST00000562310 BTAF1O14981 1849 aa17.99■□□□□ 0.47
COMMD4-205ENST00000562310 STARD3NLO95772 234 aa17.98■□□□□ 0.47
COMMD4-205ENST00000562310 ANXA1P04083 346 aa17.98■□□□□ 0.47
COMMD4-205ENST00000562310 RREB1Q92766 1687 aa17.98■□□□□ 0.47
COMMD4-205ENST00000562310 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 GNAI3P08754 354 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 ACSBG1Q96GR2 724 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
COMMD4-205ENST00000562310 SRCIN1Q9C0H9 1055 aa17.97■□□□□ 0.47
COMMD4-205ENST00000562310 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 PALLDQ8WX93 1383 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 MYL6BP14649 208 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 XAGE3Q8WTP9 111 aa17.96■□□□□ 0.47
COMMD4-205ENST00000562310 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
COMMD4-205ENST00000562310 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-205ENST00000562310 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
COMMD4-205ENST00000562310 BEND3Q5T5X7 828 aa17.94■□□□□ 0.46
COMMD4-205ENST00000562310 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
COMMD4-205ENST00000562310 DNAJC10Q8IXB1 793 aa17.94■□□□□ 0.46
COMMD4-205ENST00000562310 MEIS3Q99687 375 aa17.94■□□□□ 0.46
COMMD4-205ENST00000562310 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 IGHDP01880 384 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
COMMD4-205ENST00000562310 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 AIMP1Q12904 312 aaKnown RBP17.93■□□□□ 0.46
COMMD4-205ENST00000562310 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
COMMD4-205ENST00000562310 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 LINS1Q8NG48 757 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
COMMD4-205ENST00000562310 LY75O60449 1722 aa17.92■□□□□ 0.46
COMMD4-205ENST00000562310 GNAI2P04899 355 aa17.92■□□□□ 0.46
COMMD4-205ENST00000562310 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
COMMD4-205ENST00000562310 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-205ENST00000562310 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
COMMD4-205ENST00000562310 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
COMMD4-205ENST00000562310 A1BGP04217 495 aa17.91■□□□□ 0.46
COMMD4-205ENST00000562310 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-205ENST00000562310 SIK1P57059 783 aa17.91■□□□□ 0.46
COMMD4-205ENST00000562310 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-205ENST00000562310 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
COMMD4-205ENST00000562310 UBTFL1P0CB47 393 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-205ENST00000562310 ANKRD44Q8N8A2 993 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms