RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PXDNLA1KZ92 1463 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 CAVIN1Q6NZI2 390 aaKnown RBP13.32□□□□□ -0.28
NEIL1-202ENST00000561643 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
NEIL1-202ENST00000561643 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 LMBRD1Q9NUN5 540 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
NEIL1-202ENST00000561643 MCM2P49736 904 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 ZSCAN30Q86W11 494 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 SSH3Q8TE77 659 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
NEIL1-202ENST00000561643 PRPF40AO75400 957 aaKnown RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 PSME1Q06323 249 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 TEFQ10587 303 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
NEIL1-202ENST00000561643 CHPF2Q9P2E5 772 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
NEIL1-202ENST00000561643 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 ANAPC15P60006 121 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
NEIL1-202ENST00000561643 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 AOX1Q06278 1338 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
NEIL1-202ENST00000561643 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
NEIL1-202ENST00000561643 NBPF7P0C2Y1 421 aaPredicted RBP13.29□□□□□ -0.28
NEIL1-202ENST00000561643 CCDC173Q0VFZ6 552 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
NEIL1-202ENST00000561643 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 KCNQ3O43525 872 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 ANXA1P04083 346 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
NEIL1-202ENST00000561643 UPF3BQ9BZI7 483 aaKnown RBP13.29□□□□□ -0.28
NEIL1-202ENST00000561643 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
NEIL1-202ENST00000561643 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 UQCRHP07919 91 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 HOXB7P09629 217 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 ZNF445P59923 1031 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 POLA2Q14181 598 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
NEIL1-202ENST00000561643 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.28
NEIL1-202ENST00000561643 BEND3Q5T5X7 828 aa13.27□□□□□ -0.28
NEIL1-202ENST00000561643 MAP7D2Q96T17 732 aa13.27□□□□□ -0.28
NEIL1-202ENST00000561643 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.29
NEIL1-202ENST00000561643 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
NEIL1-202ENST00000561643 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
NEIL1-202ENST00000561643 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
NEIL1-202ENST00000561643 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.29
NEIL1-202ENST00000561643 CUL4AQ13619 759 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 IL25Q9H293 177 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
NEIL1-202ENST00000561643 LTN1O94822 1766 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
NEIL1-202ENST00000561643 GPT2Q8TD30 523 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 PPP1R9BQ96SB3 815 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
NEIL1-202ENST00000561643 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
NEIL1-202ENST00000561643 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
NEIL1-202ENST00000561643 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
NEIL1-202ENST00000561643 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
NEIL1-202ENST00000561643 TUBGCP6Q96RT7 1819 aa13.25□□□□□ -0.29
NEIL1-202ENST00000561643 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
NEIL1-202ENST00000561643 BRD1O95696 1058 aa13.24□□□□□ -0.29
NEIL1-202ENST00000561643 HSPA4P34932 840 aa13.24□□□□□ -0.29
NEIL1-202ENST00000561643 NFAT5O94916 1531 aa13.24□□□□□ -0.29
NEIL1-202ENST00000561643 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
NEIL1-202ENST00000561643 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
NEIL1-202ENST00000561643 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
NEIL1-202ENST00000561643 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
NEIL1-202ENST00000561643 SGSM2O43147 1006 aa13.23□□□□□ -0.29
NEIL1-202ENST00000561643 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
NEIL1-202ENST00000561643 RAD50Q92878 1312 aa13.23□□□□□ -0.29
NEIL1-202ENST00000561643 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-202ENST00000561643 ADCY9O60503 1353 aa13.23□□□□□ -0.29
NEIL1-202ENST00000561643 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
NEIL1-202ENST00000561643 MBD3O95983 291 aa13.23□□□□□ -0.29
NEIL1-202ENST00000561643 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-202ENST00000561643 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms