RNA–Protein interactions for RNA: ENST00000561559.1

AC008074.3-201, humanhuman

BASIC

Gene AC008074.3, Length 1,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008074.3-201ENST00000561559 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
AC008074.3-201ENST00000561559 COL15A1P39059 1388 aa13.62□□□□□ -0.23
AC008074.3-201ENST00000561559 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
AC008074.3-201ENST00000561559 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 TM4SF1P30408 202 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 FCHSD2O94868 740 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 STARD3NLO95772 234 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
AC008074.3-201ENST00000561559 KCNA3P22001 575 aa13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 ZNF526Q8TF50 670 aaPredicted RBP13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 ZNF496Q96IT1 587 aaPredicted RBP13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
AC008074.3-201ENST00000561559 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.23
AC008074.3-201ENST00000561559 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.23
AC008074.3-201ENST00000561559 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.23
AC008074.3-201ENST00000561559 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.23
AC008074.3-201ENST00000561559 PIM2Q9P1W9 311 aa13.58□□□□□ -0.23
AC008074.3-201ENST00000561559 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
AC008074.3-201ENST00000561559 NFIXQ14938 502 aa13.58□□□□□ -0.24
AC008074.3-201ENST00000561559 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
AC008074.3-201ENST00000561559 A0A087WZG4 1122 aa13.57□□□□□ -0.24
AC008074.3-201ENST00000561559 DALRD3Q5D0E6 543 aaKnown RBP13.57□□□□□ -0.24
AC008074.3-201ENST00000561559 FMNL2Q96PY5 1086 aa13.57□□□□□ -0.24
AC008074.3-201ENST00000561559 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
AC008074.3-201ENST00000561559 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
AC008074.3-201ENST00000561559 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
AC008074.3-201ENST00000561559 CHRNA5P30532 468 aa13.56□□□□□ -0.24
AC008074.3-201ENST00000561559 SERPINB2P05120 415 aa13.54□□□□□ -0.24
AC008074.3-201ENST00000561559 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
AC008074.3-201ENST00000561559 ARFGEF1Q9Y6D6 1849 aa13.54□□□□□ -0.24
AC008074.3-201ENST00000561559 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
AC008074.3-201ENST00000561559 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
AC008074.3-201ENST00000561559 KCNQ3O43525 872 aa13.53□□□□□ -0.24
AC008074.3-201ENST00000561559 MCM10Q7L590 875 aa13.53□□□□□ -0.24
AC008074.3-201ENST00000561559 ZNF330Q9Y3S2 320 aaPredicted RBP13.53□□□□□ -0.24
AC008074.3-201ENST00000561559 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.24
AC008074.3-201ENST00000561559 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
AC008074.3-201ENST00000561559 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.24
AC008074.3-201ENST00000561559 SCN7AQ01118 1682 aa13.52□□□□□ -0.24
AC008074.3-201ENST00000561559 AFDNP55196 1824 aaKnown RBP13.52□□□□□ -0.24
AC008074.3-201ENST00000561559 KIF3CO14782 793 aa13.52□□□□□ -0.25
AC008074.3-201ENST00000561559 A1BGP04217 495 aa13.52□□□□□ -0.25
AC008074.3-201ENST00000561559 C9orf131Q5VYM1 1079 aa13.52□□□□□ -0.25
AC008074.3-201ENST00000561559 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
AC008074.3-201ENST00000561559 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
AC008074.3-201ENST00000561559 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
AC008074.3-201ENST00000561559 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
AC008074.3-201ENST00000561559 CARMIL3Q8ND23 1372 aa13.5□□□□□ -0.25
AC008074.3-201ENST00000561559 NEFMP07197 916 aa13.5□□□□□ -0.25
AC008074.3-201ENST00000561559 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
AC008074.3-201ENST00000561559 DCTN1Q14203 1278 aa13.5□□□□□ -0.25
AC008074.3-201ENST00000561559 H0YIN7 160 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 DLEC1Q9Y238 1755 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 HSPA6P17066 643 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 TTLL6Q8N841 843 aa13.49□□□□□ -0.25
AC008074.3-201ENST00000561559 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
AC008074.3-201ENST00000561559 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
AC008074.3-201ENST00000561559 BRIP1Q9BX63 1249 aa13.48□□□□□ -0.25
AC008074.3-201ENST00000561559 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
AC008074.3-201ENST00000561559 PDE6BP35913 854 aa13.47□□□□□ -0.25
AC008074.3-201ENST00000561559 PRR5LQ6MZQ0 368 aa13.47□□□□□ -0.25
AC008074.3-201ENST00000561559 SETDB2Q96T68 719 aa13.47□□□□□ -0.25
AC008074.3-201ENST00000561559 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
AC008074.3-201ENST00000561559 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
AC008074.3-201ENST00000561559 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 KDM2BQ8NHM5 1336 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 TOMM70O94826 608 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 RASSF7Q02833 373 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
AC008074.3-201ENST00000561559 NPHP1O15259 732 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 LMNB1P20700 586 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 ST5P78524 1137 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
AC008074.3-201ENST00000561559 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
AC008074.3-201ENST00000561559 RGL2O15211 777 aa13.43□□□□□ -0.26
AC008074.3-201ENST00000561559 RALBP1Q15311 655 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms