RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SBF1O95248 1867 aa9.78□□□□□ -0.84
TPM1-231ENST00000561395 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
TPM1-231ENST00000561395 HTRA3P83110 453 aa9.77□□□□□ -0.85
TPM1-231ENST00000561395 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.85
TPM1-231ENST00000561395 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
TPM1-231ENST00000561395 LMOD3Q0VAK6 560 aa9.76□□□□□ -0.85
TPM1-231ENST00000561395 SLC34A2O95436 690 aa9.75□□□□□ -0.85
TPM1-231ENST00000561395 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
TPM1-231ENST00000561395 CALD1Q05682 793 aaKnown RBP9.75□□□□□ -0.85
TPM1-231ENST00000561395 ANKRD24Q8TF21 1146 aa9.75□□□□□ -0.85
TPM1-231ENST00000561395 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
TPM1-231ENST00000561395 CCDC88AQ3V6T2 1871 aa9.74□□□□□ -0.85
TPM1-231ENST00000561395 LTV1Q96GA3 475 aaPredicted RBP9.74□□□□□ -0.85
TPM1-231ENST00000561395 NMRK2Q9NPI5 230 aa9.74□□□□□ -0.85
TPM1-231ENST00000561395 ZBTB12Q9Y330 459 aaPredicted RBP9.74□□□□□ -0.85
TPM1-231ENST00000561395 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
TPM1-231ENST00000561395 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 MEGF6O75095 1541 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
TPM1-231ENST00000561395 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 USHBP1Q8N6Y0 703 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 FLAD1Q8NFF5 587 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
TPM1-231ENST00000561395 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
TPM1-231ENST00000561395 VIRMAQ69YN4 1812 aaKnown RBP9.71□□□□□ -0.85
TPM1-231ENST00000561395 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
TPM1-231ENST00000561395 ZNF853P0CG23 659 aa9.71□□□□□ -0.86
TPM1-231ENST00000561395 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
TPM1-231ENST00000561395 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
TPM1-231ENST00000561395 THUMPD2Q9BTF0 503 aaKnown RBP9.71□□□□□ -0.86
TPM1-231ENST00000561395 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.86
TPM1-231ENST00000561395 PLEKHG2Q9H7P9 1386 aa9.71□□□□□ -0.86
TPM1-231ENST00000561395 KCPQ6ZWJ8 1503 aa9.71□□□□□ -0.86
TPM1-231ENST00000561395 TIAM2Q8IVF5 1701 aa9.7□□□□□ -0.86
TPM1-231ENST00000561395 PLIN1O60240 522 aa9.7□□□□□ -0.86
TPM1-231ENST00000561395 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
TPM1-231ENST00000561395 GNAI1P63096 354 aa9.7□□□□□ -0.86
TPM1-231ENST00000561395 FSTL1Q12841 308 aa9.7□□□□□ -0.86
TPM1-231ENST00000561395 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
TPM1-231ENST00000561395 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
TPM1-231ENST00000561395 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
TPM1-231ENST00000561395 BCAR3O75815 825 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 HSPA1AP0DMV8 641 aaKnown RBP9.69□□□□□ -0.86
TPM1-231ENST00000561395 HSPA1BP0DMV9 641 aaKnown RBP9.69□□□□□ -0.86
TPM1-231ENST00000561395 EXOSC9Q06265 439 aaKnown RBP9.69□□□□□ -0.86
TPM1-231ENST00000561395 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 C10orf71Q711Q0 1435 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 MCM10Q7L590 875 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 PALLDQ8WX93 1383 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 ADAMTS7Q9UKP4 1686 aa9.69□□□□□ -0.86
TPM1-231ENST00000561395 PHF14O94880 888 aa9.68□□□□□ -0.86
TPM1-231ENST00000561395 AMIGO3Q86WK7 504 aa9.68□□□□□ -0.86
TPM1-231ENST00000561395 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
TPM1-231ENST00000561395 AK7Q96M32 723 aa9.68□□□□□ -0.86
TPM1-231ENST00000561395 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
TPM1-231ENST00000561395 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
TPM1-231ENST00000561395 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
TPM1-231ENST00000561395 C20orf194Q5TEA3 1177 aa9.67□□□□□ -0.86
TPM1-231ENST00000561395 ZCRB1Q8TBF4 217 aaKnown RBP9.67□□□□□ -0.86
TPM1-231ENST00000561395 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
TPM1-231ENST00000561395 SIPA1L3O60292 1781 aaPredicted RBP9.67□□□□□ -0.86
TPM1-231ENST00000561395 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
TPM1-231ENST00000561395 KDM3BQ7LBC6 1761 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
TPM1-231ENST00000561395 CHL1O00533 1208 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 AMOTQ4VCS5 1084 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 ARHGAP27Q6ZUM4 889 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 EXOC6Q8TAG9 804 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
TPM1-231ENST00000561395 CEMIPQ8WUJ3 1361 aa9.65□□□□□ -0.86
TPM1-231ENST00000561395 KDM2BQ8NHM5 1336 aa9.65□□□□□ -0.86
TPM1-231ENST00000561395 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
TPM1-231ENST00000561395 PLEKHO1Q53GL0 409 aaPredicted RBP9.65□□□□□ -0.86
TPM1-231ENST00000561395 ZNF530Q6P9A1 599 aaPredicted RBP9.65□□□□□ -0.86
TPM1-231ENST00000561395 ZNF428Q96B54 188 aa9.65□□□□□ -0.86
TPM1-231ENST00000561395 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.87
TPM1-231ENST00000561395 DLEC1Q9Y238 1755 aa9.65□□□□□ -0.87
TPM1-231ENST00000561395 DICER1Q9UPY3 1922 aaKnown RBP9.64□□□□□ -0.87
TPM1-231ENST00000561395 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
TPM1-231ENST00000561395 SSFA2P28290 1259 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 PDE3AQ14432 1141 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 AKAP4Q5JQC9 854 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 C9orf131Q5VYM1 1079 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 SMC1BQ8NDV3 1235 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 IL17REQ8NFR9 667 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 SMC4Q9NTJ3 1288 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
TPM1-231ENST00000561395 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
TPM1-231ENST00000561395 A0A0G2JLW4 131 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 VAMP4O75379 141 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 MMP10P09238 476 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
TPM1-231ENST00000561395 TGFB2P61812 414 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms