RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
KNSTRN-215ENST00000561367 ST18O60284 1047 aa13□□□□□ -0.33
KNSTRN-215ENST00000561367 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
KNSTRN-215ENST00000561367 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
KNSTRN-215ENST00000561367 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 APAF1O14727 1248 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 RIPK4P57078 832 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
KNSTRN-215ENST00000561367 G3V3G9 751 aa12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 TEFQ10587 303 aa12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 MRC1P22897 1456 aa12.97□□□□□ -0.33
KNSTRN-215ENST00000561367 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
KNSTRN-215ENST00000561367 CABP4P57796 275 aa12.96□□□□□ -0.33
KNSTRN-215ENST00000561367 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
KNSTRN-215ENST00000561367 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
KNSTRN-215ENST00000561367 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
KNSTRN-215ENST00000561367 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
KNSTRN-215ENST00000561367 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
KNSTRN-215ENST00000561367 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
KNSTRN-215ENST00000561367 IL16Q14005 1332 aa12.94□□□□□ -0.34
KNSTRN-215ENST00000561367 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
KNSTRN-215ENST00000561367 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
KNSTRN-215ENST00000561367 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
KNSTRN-215ENST00000561367 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
KNSTRN-215ENST00000561367 DLG5Q8TDM6 1919 aa12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 MCM10Q7L590 875 aa12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
KNSTRN-215ENST00000561367 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 PLSCR1O15162 318 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 TRIM37O94972 964 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 GNAI1P63096 354 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 PIGBQ92521 554 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
KNSTRN-215ENST00000561367 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
KNSTRN-215ENST00000561367 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
KNSTRN-215ENST00000561367 EP400Q96L91 3159 aa12.9□□□□□ -0.34
KNSTRN-215ENST00000561367 ZNF521Q96K83 1311 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 BTBD11A6QL63 1104 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 KCNQ2O43526 872 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 BAG6P46379 1132 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
KNSTRN-215ENST00000561367 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 ITGB4P16144 1822 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 CHL1O00533 1208 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 SNPHO15079 494 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
KNSTRN-215ENST00000561367 APBA3O96018 575 aa12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 ILDR2Q71H61 639 aa12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
KNSTRN-215ENST00000561367 BTAF1O14981 1849 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 E9PSI1 815 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 PAPPAQ13219 1627 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
KNSTRN-215ENST00000561367 PPP1R37O75864 691 aa12.85□□□□□ -0.35
KNSTRN-215ENST00000561367 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
KNSTRN-215ENST00000561367 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
KNSTRN-215ENST00000561367 HOXB7P09629 217 aa12.84□□□□□ -0.35
KNSTRN-215ENST00000561367 MARVELD3Q96A59 401 aa12.84□□□□□ -0.35
KNSTRN-215ENST00000561367 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
KNSTRN-215ENST00000561367 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
KNSTRN-215ENST00000561367 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
KNSTRN-215ENST00000561367 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
KNSTRN-215ENST00000561367 SIK1P57059 783 aa12.83□□□□□ -0.36
KNSTRN-215ENST00000561367 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms