RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
CARMIL3-204ENST00000561354 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
CARMIL3-204ENST00000561354 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
CARMIL3-204ENST00000561354 KDM2BQ8NHM5 1336 aa16.03■□□□□ 0.16
CARMIL3-204ENST00000561354 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
CARMIL3-204ENST00000561354 NFIXQ14938 502 aa16.03■□□□□ 0.16
CARMIL3-204ENST00000561354 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
CARMIL3-204ENST00000561354 COL15A1P39059 1388 aa16.02■□□□□ 0.16
CARMIL3-204ENST00000561354 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
CARMIL3-204ENST00000561354 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
CARMIL3-204ENST00000561354 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
CARMIL3-204ENST00000561354 C16orf71Q8IYS4 520 aaPredicted RBP16.01■□□□□ 0.15
CARMIL3-204ENST00000561354 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
CARMIL3-204ENST00000561354 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
CARMIL3-204ENST00000561354 NRXN2Q9P2S2 1712 aa16■□□□□ 0.15
CARMIL3-204ENST00000561354 SERPINB2P05120 415 aa16■□□□□ 0.15
CARMIL3-204ENST00000561354 FSTL1Q12841 308 aa16■□□□□ 0.15
CARMIL3-204ENST00000561354 SBF1O95248 1867 aa15.99■□□□□ 0.15
CARMIL3-204ENST00000561354 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
CARMIL3-204ENST00000561354 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
CARMIL3-204ENST00000561354 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
CARMIL3-204ENST00000561354 STARD3NLO95772 234 aa15.98■□□□□ 0.15
CARMIL3-204ENST00000561354 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
CARMIL3-204ENST00000561354 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
CARMIL3-204ENST00000561354 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
CARMIL3-204ENST00000561354 NPC1L1Q9UHC9 1359 aa15.98■□□□□ 0.15
CARMIL3-204ENST00000561354 A0A087WZG4 1122 aa15.97■□□□□ 0.15
CARMIL3-204ENST00000561354 TTLL6Q8N841 843 aa15.97■□□□□ 0.15
CARMIL3-204ENST00000561354 RRAGCQ9HB90 399 aa15.97■□□□□ 0.15
CARMIL3-204ENST00000561354 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
CARMIL3-204ENST00000561354 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 DLEC1Q9Y238 1755 aa15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 LMNB1P20700 586 aa15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 IL17REQ8NFR9 667 aa15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
CARMIL3-204ENST00000561354 COL3A1P02461 1466 aaPredicted RBP15.96■□□□□ 0.14
CARMIL3-204ENST00000561354 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 H0YIN7 160 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 RASSF7Q02833 373 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 TEFQ10587 303 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 C2CD5Q86YS7 1000 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 ZNF496Q96IT1 587 aaPredicted RBP15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 PDZRN3Q9UPQ7 1066 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
CARMIL3-204ENST00000561354 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
CARMIL3-204ENST00000561354 CARMIL3Q8ND23 1372 aa15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 GLTPD2A6NH11 291 aa15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 PRELPP51888 382 aa15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 SMC1BQ8NDV3 1235 aa15.93■□□□□ 0.14
CARMIL3-204ENST00000561354 VEGFAP15692 232 aaPredicted RBP15.92■□□□□ 0.14
CARMIL3-204ENST00000561354 TBC1D9BQ66K14 1250 aa15.92■□□□□ 0.14
CARMIL3-204ENST00000561354 JMYQ8N9B5 988 aa15.92■□□□□ 0.14
CARMIL3-204ENST00000561354 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
CARMIL3-204ENST00000561354 CEMIPQ8WUJ3 1361 aa15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 SIPA1L3O60292 1781 aaPredicted RBP15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 NFKBIEO00221 500 aa15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 PDE6BP35913 854 aa15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 HTRA3P83110 453 aa15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
CARMIL3-204ENST00000561354 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
CARMIL3-204ENST00000561354 TBC1D2BQ9UPU7 963 aa15.9■□□□□ 0.14
CARMIL3-204ENST00000561354 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
CARMIL3-204ENST00000561354 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
CARMIL3-204ENST00000561354 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
CARMIL3-204ENST00000561354 A1BGP04217 495 aa15.88■□□□□ 0.13
CARMIL3-204ENST00000561354 ZNF622Q969S3 477 aaKnown RBP eCLIP15.88■□□□□ 0.13
CARMIL3-204ENST00000561354 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
CARMIL3-204ENST00000561354 CCDC88AQ3V6T2 1871 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
CARMIL3-204ENST00000561354 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 KCNQ3O43525 872 aa15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 C21orf2O43822 256 aa15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 LTBP3Q9NS15 1303 aa15.86■□□□□ 0.13
CARMIL3-204ENST00000561354 POTECB2RU33 542 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 STYK1Q6J9G0 422 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 CCDC24Q8N4L8 307 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 CNKSR1Q969H4 720 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 NUDCQ9Y266 331 aa15.85■□□□□ 0.13
CARMIL3-204ENST00000561354 FER1L6Q2WGJ9 1857 aa15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 SRGNP10124 158 aa15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 ST5P78524 1137 aa15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 CLEC4GQ6UXB4 293 aa15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 DZIP3Q86Y13 1208 aaKnown RBP15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
CARMIL3-204ENST00000561354 COL11A2P13942 1736 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms