RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
PSME1-208ENST00000561059 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
PSME1-208ENST00000561059 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
PSME1-208ENST00000561059 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
PSME1-208ENST00000561059 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
PSME1-208ENST00000561059 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
PSME1-208ENST00000561059 NMRK2Q9NPI5 230 aa18.04■□□□□ 0.48
PSME1-208ENST00000561059 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
PSME1-208ENST00000561059 HSPA6P17066 643 aa18.03■□□□□ 0.48
PSME1-208ENST00000561059 TEFQ10587 303 aa18.03■□□□□ 0.48
PSME1-208ENST00000561059 ZNF496Q96IT1 587 aaPredicted RBP18.03■□□□□ 0.48
PSME1-208ENST00000561059 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
PSME1-208ENST00000561059 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
PSME1-208ENST00000561059 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
PSME1-208ENST00000561059 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.47
PSME1-208ENST00000561059 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.47
PSME1-208ENST00000561059 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
PSME1-208ENST00000561059 KCNQ3O43525 872 aa18.01■□□□□ 0.47
PSME1-208ENST00000561059 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
PSME1-208ENST00000561059 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
PSME1-208ENST00000561059 STARD3NLO95772 234 aa18■□□□□ 0.47
PSME1-208ENST00000561059 SERPINB2P05120 415 aa18■□□□□ 0.47
PSME1-208ENST00000561059 ZNF790Q6PG37 636 aa18■□□□□ 0.47
PSME1-208ENST00000561059 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
PSME1-208ENST00000561059 CCDC24Q8N4L8 307 aa18■□□□□ 0.47
PSME1-208ENST00000561059 RNF181Q9P0P0 153 aa18■□□□□ 0.47
PSME1-208ENST00000561059 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
PSME1-208ENST00000561059 RASSF7Q02833 373 aa17.99■□□□□ 0.47
PSME1-208ENST00000561059 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
PSME1-208ENST00000561059 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
PSME1-208ENST00000561059 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
PSME1-208ENST00000561059 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
PSME1-208ENST00000561059 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
PSME1-208ENST00000561059 A1BGP04217 495 aa17.97■□□□□ 0.47
PSME1-208ENST00000561059 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
PSME1-208ENST00000561059 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
PSME1-208ENST00000561059 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
PSME1-208ENST00000561059 U2AF1L5P0DN76 240 aaPredicted RBP17.96■□□□□ 0.47
PSME1-208ENST00000561059 PPP2R1AP30153 589 aa17.96■□□□□ 0.47
PSME1-208ENST00000561059 U2AF1Q01081 240 aaKnown RBP eCLIP17.96■□□□□ 0.47
PSME1-208ENST00000561059 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
PSME1-208ENST00000561059 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
PSME1-208ENST00000561059 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
PSME1-208ENST00000561059 DCTN1Q14203 1278 aa17.95■□□□□ 0.46
PSME1-208ENST00000561059 MCM10Q7L590 875 aa17.95■□□□□ 0.46
PSME1-208ENST00000561059 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
PSME1-208ENST00000561059 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
PSME1-208ENST00000561059 PRELPP51888 382 aa17.94■□□□□ 0.46
PSME1-208ENST00000561059 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
PSME1-208ENST00000561059 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
PSME1-208ENST00000561059 CEMIPQ8WUJ3 1361 aa17.93■□□□□ 0.46
PSME1-208ENST00000561059 A0A087WZG4 1122 aa17.93■□□□□ 0.46
PSME1-208ENST00000561059 TOMM70O94826 608 aa17.93■□□□□ 0.46
PSME1-208ENST00000561059 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
PSME1-208ENST00000561059 SIPA1L3O60292 1781 aaPredicted RBP17.92■□□□□ 0.46
PSME1-208ENST00000561059 HTRA3P83110 453 aa17.92■□□□□ 0.46
PSME1-208ENST00000561059 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
PSME1-208ENST00000561059 ZNF622Q969S3 477 aaKnown RBP eCLIP17.92■□□□□ 0.462e-7■■■■□ 20.5
PSME1-208ENST00000561059 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
PSME1-208ENST00000561059 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
PSME1-208ENST00000561059 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
PSME1-208ENST00000561059 H0YIN7 160 aa17.91■□□□□ 0.46
PSME1-208ENST00000561059 C16orf71Q8IYS4 520 aaPredicted RBP17.91■□□□□ 0.46
PSME1-208ENST00000561059 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
PSME1-208ENST00000561059 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
PSME1-208ENST00000561059 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
PSME1-208ENST00000561059 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
PSME1-208ENST00000561059 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
PSME1-208ENST00000561059 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
PSME1-208ENST00000561059 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
PSME1-208ENST00000561059 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
PSME1-208ENST00000561059 SCN7AQ01118 1682 aa17.88■□□□□ 0.45
PSME1-208ENST00000561059 NFKBIEO00221 500 aa17.88■□□□□ 0.45
PSME1-208ENST00000561059 APLP1P51693 650 aa17.88■□□□□ 0.45
PSME1-208ENST00000561059 NPM2Q86SE8 214 aaKnown RBP17.88■□□□□ 0.45
PSME1-208ENST00000561059 NPHP1O15259 732 aa17.87■□□□□ 0.45
PSME1-208ENST00000561059 C21orf2O43822 256 aa17.87■□□□□ 0.45
PSME1-208ENST00000561059 LMNB1P20700 586 aa17.87■□□□□ 0.45
PSME1-208ENST00000561059 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
PSME1-208ENST00000561059 CNBD1Q8NA66 436 aa17.86■□□□□ 0.45
PSME1-208ENST00000561059 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
PSME1-208ENST00000561059 BRIP1Q9BX63 1249 aa17.86■□□□□ 0.45
PSME1-208ENST00000561059 SBF1O95248 1867 aa17.85■□□□□ 0.45
PSME1-208ENST00000561059 ANKRD31Q8N7Z5 1873 aa17.85■□□□□ 0.45
PSME1-208ENST00000561059 DLEC1Q9Y238 1755 aa17.85■□□□□ 0.45
PSME1-208ENST00000561059 COL11A2P13942 1736 aaPredicted RBP17.84■□□□□ 0.45
PSME1-208ENST00000561059 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
PSME1-208ENST00000561059 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
PSME1-208ENST00000561059 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
PSME1-208ENST00000561059 PDE6BP35913 854 aa17.84■□□□□ 0.45
PSME1-208ENST00000561059 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
PSME1-208ENST00000561059 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
PSME1-208ENST00000561059 DNAJC5GQ8N7S2 189 aa17.84■□□□□ 0.45
PSME1-208ENST00000561059 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
PSME1-208ENST00000561059 ST5P78524 1137 aa17.82■□□□□ 0.44
PSME1-208ENST00000561059 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
PSME1-208ENST00000561059 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
PSME1-208ENST00000561059 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
PSME1-208ENST00000561059 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
PSME1-208ENST00000561059 SRGNP10124 158 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms