RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 UBR2Q8IWV8 1755 aa28.42■■■□□ 2.14
SNX22-205ENST00000560945 PTCD1O75127 700 aaKnown RBP28.42■■■□□ 2.14
SNX22-205ENST00000560945 BCL9O00512 1426 aa28.42■■■□□ 2.14
SNX22-205ENST00000560945 F6X3S4 739 aa28.41■■■□□ 2.14
SNX22-205ENST00000560945 SNRPA1P09661 255 aaKnown RBP28.41■■■□□ 2.14
SNX22-205ENST00000560945 ATG3Q9NT62 314 aa28.41■■■□□ 2.14
SNX22-205ENST00000560945 ZNF772Q68DY9 489 aaPredicted RBP28.4■■■□□ 2.14
SNX22-205ENST00000560945 FKBP5Q13451 457 aaPredicted RBP28.38■■■□□ 2.13
SNX22-205ENST00000560945 PDIA6Q15084 440 aa28.38■■■□□ 2.13
SNX22-205ENST00000560945 PIP4K2AP48426 406 aaPredicted RBP28.37■■■□□ 2.13
SNX22-205ENST00000560945 DBF4Q9UBU7 674 aaPredicted RBP28.37■■■□□ 2.13
SNX22-205ENST00000560945 DDX19BQ9UMR2 479 aa28.37■■■□□ 2.13
SNX22-205ENST00000560945 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
SNX22-205ENST00000560945 PCDHB15Q9Y5E8 787 aa28.34■■■□□ 2.13
SNX22-205ENST00000560945 KCNQ2O43526 872 aa28.34■■■□□ 2.13
SNX22-205ENST00000560945 INTS3Q68E01 1043 aaKnown RBP28.34■■■□□ 2.13
SNX22-205ENST00000560945 SLC4A10Q6U841 1118 aa28.34■■■□□ 2.13
SNX22-205ENST00000560945 DDX21Q9NR30 783 aaKnown RBP eCLIP28.33■■■□□ 2.13
SNX22-205ENST00000560945 KAT6BQ8WYB5 2073 aa28.32■■■□□ 2.12
SNX22-205ENST00000560945 ZBTB7BO15156 539 aaPredicted RBP28.32■■■□□ 2.12
SNX22-205ENST00000560945 MYL6BP14649 208 aa28.32■■■□□ 2.12
SNX22-205ENST00000560945 RBM42Q9BTD8 480 aaKnown RBP28.32■■■□□ 2.12
SNX22-205ENST00000560945 CHMP4AQ9BY43 222 aa28.32■■■□□ 2.12
SNX22-205ENST00000560945 LAMB4A4D0S4 1761 aa28.32■■■□□ 2.12
SNX22-205ENST00000560945 ONECUT3O60422 494 aaPredicted RBP28.32■■■□□ 2.12
SNX22-205ENST00000560945 ZBTB40Q9NUA8 1239 aa28.32■■■□□ 2.12
SNX22-205ENST00000560945 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
SNX22-205ENST00000560945 SLC4A9Q96Q91 983 aa28.31■■■□□ 2.12
SNX22-205ENST00000560945 CACNA1FO60840 1977 aa28.29■■■□□ 2.12
SNX22-205ENST00000560945 IGHDP01880 384 aa28.29■■■□□ 2.12
SNX22-205ENST00000560945 PTF1AQ7RTS3 328 aa28.29■■■□□ 2.12
SNX22-205ENST00000560945 LRP10Q7Z4F1 713 aa28.29■■■□□ 2.12
SNX22-205ENST00000560945 ADCY9O60503 1353 aa28.28■■■□□ 2.12
SNX22-205ENST00000560945 AIMP1Q12904 312 aaKnown RBP28.28■■■□□ 2.12
SNX22-205ENST00000560945 DNAJC10Q8IXB1 793 aa28.28■■■□□ 2.12
SNX22-205ENST00000560945 HYPKQ9NX55 129 aa28.28■■■□□ 2.12
SNX22-205ENST00000560945 KDM2BQ8NHM5 1336 aa28.28■■■□□ 2.12
SNX22-205ENST00000560945 C1orf115Q9H7X2 142 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 PI4KAP2A4QPH2 592 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 NBPF26B4DH59 902 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 A1BGP04217 495 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 NBPF14Q5TI25 921 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 NBPF10Q6P3W6 841 aaKnown RBP28.27■■■□□ 2.12
SNX22-205ENST00000560945 NBPF15Q8N660 670 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 PI4KAP1Q8N8J0 262 aa28.27■■■□□ 2.12
SNX22-205ENST00000560945 RGS17Q9UGC6 210 aaPredicted RBP28.27■■■□□ 2.12
SNX22-205ENST00000560945 RBM6P78332 1123 aaKnown RBP28.26■■■□□ 2.11
SNX22-205ENST00000560945 AAMPQ13685 434 aa28.25■■■□□ 2.11
SNX22-205ENST00000560945 XAGE3Q8WTP9 111 aa28.25■■■□□ 2.11
SNX22-205ENST00000560945 BRWD3Q6RI45 1802 aa28.24■■■□□ 2.11
SNX22-205ENST00000560945 CCT4P50991 539 aaKnown RBP28.23■■■□□ 2.11
SNX22-205ENST00000560945 MEIS3Q99687 375 aa28.23■■■□□ 2.11
SNX22-205ENST00000560945 COPS6Q7L5N1 327 aa28.22■■■□□ 2.11
SNX22-205ENST00000560945 VSIG10Q8N0Z9 540 aa28.22■■■□□ 2.11
SNX22-205ENST00000560945 DNAAF4Q8WXU2 420 aa28.22■■■□□ 2.11
SNX22-205ENST00000560945 MAP3K2Q9Y2U5 619 aa28.22■■■□□ 2.11
SNX22-205ENST00000560945 PXDNLA1KZ92 1463 aa28.21■■■□□ 2.11
SNX22-205ENST00000560945 RXRBP28702 533 aa28.21■■■□□ 2.11
SNX22-205ENST00000560945 SKAP1Q86WV1 359 aa28.2■■■□□ 2.11
SNX22-205ENST00000560945 POTEAQ6S8J7 498 aa28.2■■■□□ 2.1
SNX22-205ENST00000560945 KSR2Q6VAB6 950 aa28.2■■■□□ 2.1
SNX22-205ENST00000560945 TJP1Q07157 1748 aa28.19■■■□□ 2.1
SNX22-205ENST00000560945 PALLDQ8WX93 1383 aa28.19■■■□□ 2.1
SNX22-205ENST00000560945 BEND3Q5T5X7 828 aa28.18■■■□□ 2.1
SNX22-205ENST00000560945 ERBB4Q15303 1308 aa28.18■■■□□ 2.1
SNX22-205ENST00000560945 CENPQQ7L2Z9 268 aaPredicted RBP28.18■■■□□ 2.1
SNX22-205ENST00000560945 N4BP2Q86UW6 1770 aaPredicted RBP28.17■■■□□ 2.1
SNX22-205ENST00000560945 CYP19A1P11511 503 aaPredicted RBP28.16■■■□□ 2.1
SNX22-205ENST00000560945 TEX13AQ9BXU3 409 aaPredicted RBP28.16■■■□□ 2.1
SNX22-205ENST00000560945 TTLL7Q6ZT98 887 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
SNX22-205ENST00000560945 SIK1P57059 783 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 NHSQ6T4R5 1651 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 RIC3Q7Z5B4 369 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 SRCIN1Q9C0H9 1055 aa28.15■■■□□ 2.1
SNX22-205ENST00000560945 CHMP4BQ9H444 224 aaKnown RBP28.15■■■□□ 2.1
SNX22-205ENST00000560945 ITPK1Q13572 414 aa28.14■■■□□ 2.1
SNX22-205ENST00000560945 ATP10DQ9P241 1426 aa28.14■■■□□ 2.09
SNX22-205ENST00000560945 STARD3NLO95772 234 aa28.13■■■□□ 2.09
SNX22-205ENST00000560945 SIRT2Q8IXJ6 389 aa28.13■■■□□ 2.09
SNX22-205ENST00000560945 ATP6V1AP38606 617 aa28.13■■■□□ 2.09
SNX22-205ENST00000560945 CWF19L2Q2TBE0 894 aaKnown RBP28.13■■■□□ 2.09
SNX22-205ENST00000560945 ANKRD13DQ6ZTN6 518 aa28.12■■■□□ 2.09
SNX22-205ENST00000560945 USP44Q9H0E7 712 aa28.12■■■□□ 2.09
SNX22-205ENST00000560945 ZNF330Q9Y3S2 320 aaPredicted RBP28.12■■■□□ 2.09
SNX22-205ENST00000560945 KCNQ4P56696 695 aa28.11■■■□□ 2.09
SNX22-205ENST00000560945 SMARCC1Q92922 1105 aaPredicted RBP28.11■■■□□ 2.09
SNX22-205ENST00000560945 RWDD1Q9H446 243 aaPredicted RBP28.11■■■□□ 2.09
SNX22-205ENST00000560945 ZBTB1Q9Y2K1 713 aa28.11■■■□□ 2.09
SNX22-205ENST00000560945 KRT27Q7Z3Y8 459 aa28.11■■■□□ 2.09
SNX22-205ENST00000560945 BTAF1O14981 1849 aa28.1■■■□□ 2.09
SNX22-205ENST00000560945 HDAC1Q13547 482 aaPredicted RBP28.1■■■□□ 2.09
SNX22-205ENST00000560945 MYD88Q99836 296 aa28.09■■■□□ 2.09
SNX22-205ENST00000560945 IGKV5-2P06315 115 aa28.08■■■□□ 2.09
SNX22-205ENST00000560945 SBF2Q86WG5 1849 aa28.08■■■□□ 2.09
SNX22-205ENST00000560945 METTL22Q9BUU2 404 aaPredicted RBP28.08■■■□□ 2.09
SNX22-205ENST00000560945 CEP85Q6P2H3 762 aa28.07■■■□□ 2.08
SNX22-205ENST00000560945 PLBD2Q8NHP8 589 aa28.07■■■□□ 2.08
SNX22-205ENST00000560945 ZBTB3Q9H5J0 574 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms