RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 HSPA4P34932 840 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 CNTROBQ8N137 903 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
TRPM1-211ENST00000560658 MTX1Q13505 466 aa21.46■■□□□ 1.03
TRPM1-211ENST00000560658 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
TRPM1-211ENST00000560658 CAVIN1Q6NZI2 390 aaKnown RBP21.46■■□□□ 1.03
TRPM1-211ENST00000560658 ALDH1L1O75891 902 aa21.45■■□□□ 1.02
TRPM1-211ENST00000560658 PLEKHO1Q53GL0 409 aaPredicted RBP21.45■■□□□ 1.02
TRPM1-211ENST00000560658 CERKQ8TCT0 537 aa21.45■■□□□ 1.02
TRPM1-211ENST00000560658 RHPN1Q8TCX5 695 aa21.45■■□□□ 1.02
TRPM1-211ENST00000560658 DNAAF4Q8WXU2 420 aa21.45■■□□□ 1.02
TRPM1-211ENST00000560658 PRPF40AO75400 957 aaKnown RBP21.44■■□□□ 1.02
TRPM1-211ENST00000560658 PPP1R42Q7Z4L9 355 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
TRPM1-211ENST00000560658 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
TRPM1-211ENST00000560658 LTN1O94822 1766 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
TRPM1-211ENST00000560658 PHF14O94880 888 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 NCLP19338 710 aaKnown RBP21.44■■□□□ 1.02
TRPM1-211ENST00000560658 LRSAM1Q6UWE0 723 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 ZSCAN30Q86W11 494 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 ERC1Q8IUD2 1116 aa21.44■■□□□ 1.02
TRPM1-211ENST00000560658 BEND3Q5T5X7 828 aa21.43■■□□□ 1.02
TRPM1-211ENST00000560658 RUFY2Q8WXA3 655 aa21.43■■□□□ 1.02
TRPM1-211ENST00000560658 RAD50Q92878 1312 aa21.43■■□□□ 1.02
TRPM1-211ENST00000560658 SGSM2O43147 1006 aa21.42■■□□□ 1.02
TRPM1-211ENST00000560658 PDIA4P13667 645 aaKnown RBP21.42■■□□□ 1.02
TRPM1-211ENST00000560658 GPATCH3Q96I76 525 aa21.42■■□□□ 1.02
TRPM1-211ENST00000560658 GLRX3O76003 335 aaKnown RBP21.41■■□□□ 1.02
TRPM1-211ENST00000560658 HSPA2P54652 639 aa21.41■■□□□ 1.02
TRPM1-211ENST00000560658 TEFQ10587 303 aa21.41■■□□□ 1.02
TRPM1-211ENST00000560658 PKP1Q13835 747 aa21.41■■□□□ 1.02
TRPM1-211ENST00000560658 PI4K2BQ8TCG2 481 aa21.41■■□□□ 1.02
TRPM1-211ENST00000560658 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
TRPM1-211ENST00000560658 CRYBG1Q9Y4K1 1723 aa21.41■■□□□ 1.02
TRPM1-211ENST00000560658 CHD2O14647 1828 aaKnown RBP21.41■■□□□ 1.02
TRPM1-211ENST00000560658 SRGAP3O43295 1099 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 KIAA1211Q6ZU35 1233 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 PDLIM2Q96JY6 352 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 MCM5P33992 734 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 GPT2Q8TD30 523 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 NECTIN2Q92692 538 aa21.4■■□□□ 1.02
TRPM1-211ENST00000560658 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
TRPM1-211ENST00000560658 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.01
TRPM1-211ENST00000560658 PHAXQ9H814 394 aaKnown RBP21.39■■□□□ 1.01
TRPM1-211ENST00000560658 PALD1Q9ULE6 856 aa21.39■■□□□ 1.01
TRPM1-211ENST00000560658 ANKLE2Q86XL3 938 aa21.38■■□□□ 1.01
TRPM1-211ENST00000560658 TMEM87AQ8NBN3 555 aa21.38■■□□□ 1.01
TRPM1-211ENST00000560658 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.38■■□□□ 1.01
TRPM1-211ENST00000560658 MSNP26038 577 aaKnown RBP21.37■■□□□ 1.01
TRPM1-211ENST00000560658 TERF1P54274 439 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 TSHZ3Q63HK5 1081 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 SLIT3O75094 1523 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 PLEKHG2Q9H7P9 1386 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 BTBD11A6QL63 1104 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 HIP1O00291 1037 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 TPM2P07951 284 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 CLASRPQ8N2M8 674 aaKnown RBP21.37■■□□□ 1.01
TRPM1-211ENST00000560658 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 ATP6V1DQ9Y5K8 247 aa21.37■■□□□ 1.01
TRPM1-211ENST00000560658 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
TRPM1-211ENST00000560658 LETM1O95202 739 aaPredicted RBP21.36■■□□□ 1.01
TRPM1-211ENST00000560658 C1orf141Q5JVX7 400 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
TRPM1-211ENST00000560658 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 UNC5CLQ8IV45 518 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 TM6SF1Q9BZW5 370 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 IL1RAPL2Q9NP60 686 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
TRPM1-211ENST00000560658 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 ERBB4Q15303 1308 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 PSME1Q06323 249 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 CSPP1Q1MSJ5 1256 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 LSG1Q9H089 658 aaKnown RBP21.35■■□□□ 1.01
TRPM1-211ENST00000560658 HYPKQ9NX55 129 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
TRPM1-211ENST00000560658 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
TRPM1-211ENST00000560658 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
TRPM1-211ENST00000560658 FAM184AQ8NB25 1140 aa21.34■■□□□ 1.01
TRPM1-211ENST00000560658 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
TRPM1-211ENST00000560658 RBSNQ9H1K0 784 aa21.34■■□□□ 1.01
TRPM1-211ENST00000560658 ADCY9O60503 1353 aa21.34■■□□□ 1.01
TRPM1-211ENST00000560658 AK9Q5TCS8 1911 aa21.34■■□□□ 1.01
TRPM1-211ENST00000560658 RNMTO43148 476 aaKnown RBP21.33■■□□□ 1.01
TRPM1-211ENST00000560658 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1.01
TRPM1-211ENST00000560658 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
TRPM1-211ENST00000560658 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
TRPM1-211ENST00000560658 KCNB2Q92953 911 aa21.33■■□□□ 1.01
TRPM1-211ENST00000560658 TTC14Q96N46 770 aa21.33■■□□□ 1.01
TRPM1-211ENST00000560658 TMEM63CQ9P1W3 806 aa21.33■■□□□ 1.01
TRPM1-211ENST00000560658 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
TRPM1-211ENST00000560658 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.33■■□□□ 1
TRPM1-211ENST00000560658 ECHDC1Q9NTX5 307 aa21.33■■□□□ 1
TRPM1-211ENST00000560658 NOL7Q9UMY1 257 aaKnown RBP21.33■■□□□ 1
TRPM1-211ENST00000560658 SNX14Q9Y5W7 946 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms