RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SCN4AP35499 1836 aa12.43□□□□□ -0.42
RABGGTA-217ENST00000560521 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-217ENST00000560521 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
RABGGTA-217ENST00000560521 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 NFKBIEO00221 500 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 ZPR1O75312 459 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 SLC34A2O95436 690 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 MTHFSP49914 203 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 NFIXQ14938 502 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
RABGGTA-217ENST00000560521 FOXN1O15353 648 aa12.4□□□□□ -0.42
RABGGTA-217ENST00000560521 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
RABGGTA-217ENST00000560521 SERPINB2P05120 415 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 NARFQ9UHQ1 456 aa12.39□□□□□ -0.43
RABGGTA-217ENST00000560521 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
RABGGTA-217ENST00000560521 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
RABGGTA-217ENST00000560521 COL15A1P39059 1388 aa12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 H0YIN7 160 aa12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
RABGGTA-217ENST00000560521 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
RABGGTA-217ENST00000560521 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
RABGGTA-217ENST00000560521 C21orf2O43822 256 aa12.34□□□□□ -0.43
RABGGTA-217ENST00000560521 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-217ENST00000560521 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-217ENST00000560521 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-217ENST00000560521 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
RABGGTA-217ENST00000560521 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 VEGFBP49765 207 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
RABGGTA-217ENST00000560521 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-217ENST00000560521 LBX1P52954 281 aa12.32□□□□□ -0.44
RABGGTA-217ENST00000560521 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
RABGGTA-217ENST00000560521 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
RABGGTA-217ENST00000560521 SIPA1L3O60292 1781 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 CASP8AP2Q9UKL3 1982 aa12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 MRC1P22897 1456 aa12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
RABGGTA-217ENST00000560521 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 PDE6BP35913 854 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
RABGGTA-217ENST00000560521 TMEM88BA6NKF7 163 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 VSIG10Q8N0Z9 540 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 TAF1DQ9H5J8 278 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
RABGGTA-217ENST00000560521 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-217ENST00000560521 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-217ENST00000560521 IQCA1LA6NCM1 817 aa12.27□□□□□ -0.45
RABGGTA-217ENST00000560521 IL13P35225 146 aa12.27□□□□□ -0.45
RABGGTA-217ENST00000560521 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
RABGGTA-217ENST00000560521 A0A087WZG4 1122 aa12.26□□□□□ -0.45
RABGGTA-217ENST00000560521 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
RABGGTA-217ENST00000560521 DEFB115Q30KQ5 88 aa12.26□□□□□ -0.45
RABGGTA-217ENST00000560521 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
RABGGTA-217ENST00000560521 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
RABGGTA-217ENST00000560521 SRGNP10124 158 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 RGS19P49795 217 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 EAPPQ56P03 285 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 PANK3Q9H999 370 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
RABGGTA-217ENST00000560521 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms