RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
HMG20A-210ENST00000560498 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
HMG20A-210ENST00000560498 PXDNLA1KZ92 1463 aa22.26■■□□□ 1.15
HMG20A-210ENST00000560498 C10orf71Q711Q0 1435 aa22.25■■□□□ 1.15
HMG20A-210ENST00000560498 TGFB2P61812 414 aa22.25■■□□□ 1.15
HMG20A-210ENST00000560498 USPL1Q5W0Q7 1092 aa22.25■■□□□ 1.15
HMG20A-210ENST00000560498 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
HMG20A-210ENST00000560498 FCHSD2O94868 740 aa22.24■■□□□ 1.15
HMG20A-210ENST00000560498 DPEP1P16444 411 aa22.24■■□□□ 1.15
HMG20A-210ENST00000560498 CEMIPQ8WUJ3 1361 aa22.24■■□□□ 1.15
HMG20A-210ENST00000560498 KCNQ3O43525 872 aa22.23■■□□□ 1.15
HMG20A-210ENST00000560498 ZPR1O75312 459 aa22.23■■□□□ 1.15
HMG20A-210ENST00000560498 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
HMG20A-210ENST00000560498 TM4SF1P30408 202 aa22.23■■□□□ 1.15
HMG20A-210ENST00000560498 COL13A1Q5TAT6 717 aaPredicted RBP22.23■■□□□ 1.15
HMG20A-210ENST00000560498 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
HMG20A-210ENST00000560498 KIAA1551Q9HCM1 1747 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 UBR2Q8IWV8 1755 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 BCL2L12Q9HB09 334 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 COL15A1P39059 1388 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
HMG20A-210ENST00000560498 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
HMG20A-210ENST00000560498 POLRMTO00411 1230 aaKnown RBP22.2■■□□□ 1.14
HMG20A-210ENST00000560498 STARD3NLO95772 234 aa22.2■■□□□ 1.14
HMG20A-210ENST00000560498 KCNA3P22001 575 aa22.2■■□□□ 1.14
HMG20A-210ENST00000560498 MCM10Q7L590 875 aa22.2■■□□□ 1.14
HMG20A-210ENST00000560498 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
HMG20A-210ENST00000560498 DCTN1Q14203 1278 aa22.19■■□□□ 1.14
HMG20A-210ENST00000560498 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
HMG20A-210ENST00000560498 EIF5P55010 431 aaKnown RBP22.18■■□□□ 1.14
HMG20A-210ENST00000560498 NFIXQ14938 502 aa22.18■■□□□ 1.14
HMG20A-210ENST00000560498 FMNL2Q96PY5 1086 aa22.18■■□□□ 1.14
HMG20A-210ENST00000560498 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
HMG20A-210ENST00000560498 RTF1Q92541 710 aaKnown RBP22.17■■□□□ 1.14
HMG20A-210ENST00000560498 TOMM70O94826 608 aa22.16■■□□□ 1.14
HMG20A-210ENST00000560498 TEX13AQ9BXU3 409 aaPredicted RBP22.16■■□□□ 1.14
HMG20A-210ENST00000560498 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
HMG20A-210ENST00000560498 A1BGP04217 495 aa22.15■■□□□ 1.14
HMG20A-210ENST00000560498 PRAMEF22A3QJZ6 481 aa22.14■■□□□ 1.13
HMG20A-210ENST00000560498 CHRNA5P30532 468 aa22.14■■□□□ 1.13
HMG20A-210ENST00000560498 HTRA3P83110 453 aa22.13■■□□□ 1.13
HMG20A-210ENST00000560498 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
HMG20A-210ENST00000560498 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
HMG20A-210ENST00000560498 ZNF330Q9Y3S2 320 aaPredicted RBP22.13■■□□□ 1.13
HMG20A-210ENST00000560498 USP16Q9Y5T5 823 aa22.13■■□□□ 1.13
HMG20A-210ENST00000560498 HTATSF1O43719 755 aaKnown RBP22.12■■□□□ 1.13
HMG20A-210ENST00000560498 SERPINB2P05120 415 aa22.12■■□□□ 1.13
HMG20A-210ENST00000560498 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
HMG20A-210ENST00000560498 ARHGAP27Q6ZUM4 889 aa22.12■■□□□ 1.13
HMG20A-210ENST00000560498 PLEKHF1Q96S99 279 aa22.12■■□□□ 1.13
HMG20A-210ENST00000560498 A0A087WZG4 1122 aa22.11■■□□□ 1.13
HMG20A-210ENST00000560498 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
HMG20A-210ENST00000560498 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
HMG20A-210ENST00000560498 TNS4Q8IZW8 715 aa22.11■■□□□ 1.13
HMG20A-210ENST00000560498 PIP4K2AP48426 406 aaPredicted RBP22.1■■□□□ 1.13
HMG20A-210ENST00000560498 PRELPP51888 382 aa22.1■■□□□ 1.13
HMG20A-210ENST00000560498 KLRG1Q96E93 195 aa22.1■■□□□ 1.13
HMG20A-210ENST00000560498 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
HMG20A-210ENST00000560498 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
HMG20A-210ENST00000560498 TBC1D9BQ66K14 1250 aa22.09■■□□□ 1.13
HMG20A-210ENST00000560498 NMRK2Q9NPI5 230 aa22.09■■□□□ 1.13
HMG20A-210ENST00000560498 PCNTO95613 3336 aa22.09■■□□□ 1.13
HMG20A-210ENST00000560498 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
HMG20A-210ENST00000560498 SNRPA1P09661 255 aaKnown RBP22.07■■□□□ 1.12
HMG20A-210ENST00000560498 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
HMG20A-210ENST00000560498 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
HMG20A-210ENST00000560498 NEFMP07197 916 aa22.06■■□□□ 1.12
HMG20A-210ENST00000560498 RALBP1Q15311 655 aa22.06■■□□□ 1.12
HMG20A-210ENST00000560498 CARMIL3Q8ND23 1372 aa22.05■■□□□ 1.12
HMG20A-210ENST00000560498 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
HMG20A-210ENST00000560498 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
HMG20A-210ENST00000560498 THUMPD2Q9BTF0 503 aaKnown RBP22.05■■□□□ 1.12
HMG20A-210ENST00000560498 AFDNP55196 1824 aaKnown RBP22.05■■□□□ 1.12
HMG20A-210ENST00000560498 NRXN2Q9P2S2 1712 aa22.04■■□□□ 1.12
HMG20A-210ENST00000560498 CCDC24Q8N4L8 307 aa22.04■■□□□ 1.12
HMG20A-210ENST00000560498 NBPF26B4DH59 902 aa22.03■■□□□ 1.12
HMG20A-210ENST00000560498 NBPF10Q6P3W6 841 aaKnown RBP22.03■■□□□ 1.12
HMG20A-210ENST00000560498 DZIP3Q86Y13 1208 aaKnown RBP22.03■■□□□ 1.12
HMG20A-210ENST00000560498 NBPF15Q8N660 670 aa22.03■■□□□ 1.12
HMG20A-210ENST00000560498 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.12
HMG20A-210ENST00000560498 C2CD5Q86YS7 1000 aa22.02■■□□□ 1.12
HMG20A-210ENST00000560498 RBM46Q8TBY0 533 aaKnown RBP22.02■■□□□ 1.12
HMG20A-210ENST00000560498 C9orf131Q5VYM1 1079 aa22.01■■□□□ 1.11
HMG20A-210ENST00000560498 PRR5LQ6MZQ0 368 aa22■■□□□ 1.11
HMG20A-210ENST00000560498 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
HMG20A-210ENST00000560498 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
HMG20A-210ENST00000560498 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
HMG20A-210ENST00000560498 H0YIN7 160 aa21.99■■□□□ 1.11
HMG20A-210ENST00000560498 C16orf71Q8IYS4 520 aaPredicted RBP21.99■■□□□ 1.11
HMG20A-210ENST00000560498 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
HMG20A-210ENST00000560498 SCN7AQ01118 1682 aa21.98■■□□□ 1.11
HMG20A-210ENST00000560498 DLG5Q8TDM6 1919 aa21.98■■□□□ 1.11
HMG20A-210ENST00000560498 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
HMG20A-210ENST00000560498 EIF4A1P60842 406 aaKnown RBP21.97■■□□□ 1.11
HMG20A-210ENST00000560498 TTLL6Q8N841 843 aa21.97■■□□□ 1.11
HMG20A-210ENST00000560498 BRIP1Q9BX63 1249 aa21.97■■□□□ 1.11
HMG20A-210ENST00000560498 MYBBP1AQ9BQG0 1328 aaKnown RBP21.97■■□□□ 1.11
HMG20A-210ENST00000560498 RIPK4P57078 832 aa21.95■■□□□ 1.1
HMG20A-210ENST00000560498 RASSF7Q02833 373 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms