RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
HERC1-208ENST00000560462 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
HERC1-208ENST00000560462 TAF1DQ9H5J8 278 aaPredicted RBP9.63□□□□□ -0.87
HERC1-208ENST00000560462 TIMELESSQ9UNS1 1208 aa9.63□□□□□ -0.87
HERC1-208ENST00000560462 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
HERC1-208ENST00000560462 GNPATO15228 680 aa9.62□□□□□ -0.87
HERC1-208ENST00000560462 ERFEQ4G0M1 354 aa9.62□□□□□ -0.87
HERC1-208ENST00000560462 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
HERC1-208ENST00000560462 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
HERC1-208ENST00000560462 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
HERC1-208ENST00000560462 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
HERC1-208ENST00000560462 STK25O00506 426 aa9.61□□□□□ -0.87
HERC1-208ENST00000560462 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
HERC1-208ENST00000560462 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
HERC1-208ENST00000560462 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
HERC1-208ENST00000560462 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
HERC1-208ENST00000560462 ADGRB1O14514 1584 aa9.6□□□□□ -0.87
HERC1-208ENST00000560462 NFKBIEO00221 500 aa9.6□□□□□ -0.87
HERC1-208ENST00000560462 TMEM132AQ24JP5 1023 aa9.6□□□□□ -0.87
HERC1-208ENST00000560462 FAM212AQ96EL1 285 aa9.6□□□□□ -0.87
HERC1-208ENST00000560462 ANKRD24Q8TF21 1146 aa9.59□□□□□ -0.87
HERC1-208ENST00000560462 L3MBTL3Q96JM7 780 aaPredicted RBP9.59□□□□□ -0.87
HERC1-208ENST00000560462 COL25A1Q9BXS0 654 aaPredicted RBP9.59□□□□□ -0.87
HERC1-208ENST00000560462 CIAPIN1Q6FI81 312 aa9.58□□□□□ -0.88
HERC1-208ENST00000560462 CTU1Q7Z7A3 348 aaKnown RBP9.58□□□□□ -0.88
HERC1-208ENST00000560462 LINC00116Q8NCU8 138 aa9.58□□□□□ -0.88
HERC1-208ENST00000560462 SMARCC1Q92922 1105 aaPredicted RBP9.58□□□□□ -0.88
HERC1-208ENST00000560462 NFAT5O94916 1531 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 GYS1P13807 737 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 ITGAEP38570 1179 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
HERC1-208ENST00000560462 ZCRB1Q8TBF4 217 aaKnown RBP9.57□□□□□ -0.88
HERC1-208ENST00000560462 TLL2Q9Y6L7 1015 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
HERC1-208ENST00000560462 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
HERC1-208ENST00000560462 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
HERC1-208ENST00000560462 PRDM6Q9NQX0 595 aa9.56□□□□□ -0.88
HERC1-208ENST00000560462 ADAMTSL1Q8N6G6 1762 aa9.55□□□□□ -0.88
HERC1-208ENST00000560462 SCN4AP35499 1836 aa9.55□□□□□ -0.88
HERC1-208ENST00000560462 EPHX2P34913 555 aa9.55□□□□□ -0.88
HERC1-208ENST00000560462 HACL1Q9UJ83 578 aa9.55□□□□□ -0.88
HERC1-208ENST00000560462 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
HERC1-208ENST00000560462 CCDC88AQ3V6T2 1871 aa9.55□□□□□ -0.88
HERC1-208ENST00000560462 CST9Q5W186 159 aa9.54□□□□□ -0.88
HERC1-208ENST00000560462 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
HERC1-208ENST00000560462 LOC102724428A0A0B4J2F2 783 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 RFC4P35249 363 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 SIK1P57059 783 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 FMR1Q06787 632 aaKnown RBP eCLIP9.53□□□□□ -0.88
HERC1-208ENST00000560462 PKN2Q16513 984 aaKnown RBP9.53□□□□□ -0.88
HERC1-208ENST00000560462 AKAP4Q5JQC9 854 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
HERC1-208ENST00000560462 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
HERC1-208ENST00000560462 CABP2Q9NPB3 220 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 SAGE1Q9NXZ1 904 aa9.53□□□□□ -0.88
HERC1-208ENST00000560462 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
HERC1-208ENST00000560462 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
HERC1-208ENST00000560462 HHIPL1Q96JK4 782 aa9.52□□□□□ -0.89
HERC1-208ENST00000560462 COL9A1P20849 921 aa9.51□□□□□ -0.89
HERC1-208ENST00000560462 DDR1Q08345 913 aa9.51□□□□□ -0.89
HERC1-208ENST00000560462 NOGQ13253 232 aa9.51□□□□□ -0.89
HERC1-208ENST00000560462 ITPK1Q13572 414 aa9.51□□□□□ -0.89
HERC1-208ENST00000560462 RANBP2P49792 3224 aaKnown RBP9.5□□□□□ -0.89
HERC1-208ENST00000560462 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
HERC1-208ENST00000560462 CABP1Q9NZU7 370 aa9.5□□□□□ -0.89
HERC1-208ENST00000560462 STK24Q9Y6E0 443 aa9.5□□□□□ -0.89
HERC1-208ENST00000560462 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
HERC1-208ENST00000560462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
HERC1-208ENST00000560462 PLA2G5P39877 138 aa9.49□□□□□ -0.89
HERC1-208ENST00000560462 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
HERC1-208ENST00000560462 TAOK3Q9H2K8 898 aa9.49□□□□□ -0.89
HERC1-208ENST00000560462 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
HERC1-208ENST00000560462 LTBP3Q9NS15 1303 aa9.49□□□□□ -0.89
HERC1-208ENST00000560462 TRAF5O00463 557 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 TRPA1O75762 1119 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 RNF123Q5XPI4 1314 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
HERC1-208ENST00000560462 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
HERC1-208ENST00000560462 C21orf2O43822 256 aa9.47□□□□□ -0.89
HERC1-208ENST00000560462 PIGBQ92521 554 aa9.47□□□□□ -0.89
HERC1-208ENST00000560462 FAM122AQ96E09 287 aa9.47□□□□□ -0.89
HERC1-208ENST00000560462 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
HERC1-208ENST00000560462 INSRP06213 1382 aa9.47□□□□□ -0.89
HERC1-208ENST00000560462 VCANP13611 3396 aa9.47□□□□□ -0.89
HERC1-208ENST00000560462 SMG6Q86US8 1419 aaKnown RBP9.47□□□□□ -0.89
HERC1-208ENST00000560462 CACNA1AO00555 2505 aa9.46□□□□□ -0.89
HERC1-208ENST00000560462 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 C2CD5Q86YS7 1000 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 MAP2P11137 1827 aaKnown RBP9.46□□□□□ -0.9
HERC1-208ENST00000560462 BRCA2P51587 3418 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 ZNF541Q9H0D2 1346 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 USP31Q70CQ4 1352 aa9.46□□□□□ -0.9
HERC1-208ENST00000560462 H0YGN5 161 aa9.45□□□□□ -0.9
HERC1-208ENST00000560462 H0YIN7 160 aa9.45□□□□□ -0.9
HERC1-208ENST00000560462 CELF2O95319 508 aaKnown RBP9.45□□□□□ -0.9
HERC1-208ENST00000560462 BICDL1Q6ZP65 573 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms