RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 DNAJC10Q8IXB1 793 aa15.12■□□□□ 0.01
LINC02253-202ENST00000560314 ZC3H4Q9UPT8 1303 aaKnown RBP15.12■□□□□ 0.01
LINC02253-202ENST00000560314 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
LINC02253-202ENST00000560314 CYP19A1P11511 503 aaPredicted RBP15.11■□□□□ 0.01
LINC02253-202ENST00000560314 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
LINC02253-202ENST00000560314 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
LINC02253-202ENST00000560314 KDM2BQ8NHM5 1336 aa15.11■□□□□ 0.01
LINC02253-202ENST00000560314 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
LINC02253-202ENST00000560314 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
LINC02253-202ENST00000560314 HMOX1P09601 288 aa15.1■□□□□ 0.01
LINC02253-202ENST00000560314 USPL1Q5W0Q7 1092 aa15.1■□□□□ 0.01
LINC02253-202ENST00000560314 LGR6Q9HBX8 967 aa15.1■□□□□ 0.01
LINC02253-202ENST00000560314 NMRK2Q9NPI5 230 aa15.1■□□□□ 0.01
LINC02253-202ENST00000560314 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
LINC02253-202ENST00000560314 SCN7AQ01118 1682 aa15.09■□□□□ 0.01
LINC02253-202ENST00000560314 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
LINC02253-202ENST00000560314 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
LINC02253-202ENST00000560314 SLC39A6Q13433 755 aa15.09■□□□□ 0.01
LINC02253-202ENST00000560314 ZBTB1Q9Y2K1 713 aa15.09■□□□□ 0.01
LINC02253-202ENST00000560314 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
LINC02253-202ENST00000560314 CHRNA5P30532 468 aa15.08■□□□□ 0
LINC02253-202ENST00000560314 NFIXQ14938 502 aa15.08■□□□□ 0
LINC02253-202ENST00000560314 MTHFSDQ2M296 383 aaKnown RBP15.08■□□□□ 0
LINC02253-202ENST00000560314 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
LINC02253-202ENST00000560314 RNF181Q9P0P0 153 aa15.08■□□□□ 0
LINC02253-202ENST00000560314 FSTL1Q12841 308 aa15.07■□□□□ 0
LINC02253-202ENST00000560314 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
LINC02253-202ENST00000560314 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
LINC02253-202ENST00000560314 STARD3NLO95772 234 aa15.06■□□□□ 0
LINC02253-202ENST00000560314 A0A087WZG4 1122 aa15.05■□□□□ -0
LINC02253-202ENST00000560314 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
LINC02253-202ENST00000560314 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
LINC02253-202ENST00000560314 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
LINC02253-202ENST00000560314 HEG1Q9ULI3 1381 aa15.04■□□□□ -0
LINC02253-202ENST00000560314 SERPINB2P05120 415 aa15.04■□□□□ -0
LINC02253-202ENST00000560314 TEX13AQ9BXU3 409 aaPredicted RBP15.04■□□□□ -0
LINC02253-202ENST00000560314 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
LINC02253-202ENST00000560314 PDZRN3Q9UPQ7 1066 aa15.04■□□□□ -0
LINC02253-202ENST00000560314 ANKRD31Q8N7Z5 1873 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 LMNB1P20700 586 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 EIF5P55010 431 aaKnown RBP15.03■□□□□ -0
LINC02253-202ENST00000560314 TEFQ10587 303 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 DNAJC5GQ8N7S2 189 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 TTLL6Q8N841 843 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 BCORQ6W2J9 1755 aa15.03■□□□□ -0
LINC02253-202ENST00000560314 DICER1Q9UPY3 1922 aaKnown RBP15.02■□□□□ -0
LINC02253-202ENST00000560314 GNAT3A8MTJ3 354 aa15.02■□□□□ -0
LINC02253-202ENST00000560314 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
LINC02253-202ENST00000560314 ZNF790Q6PG37 636 aa15.02■□□□□ -0
LINC02253-202ENST00000560314 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 COL11A2P13942 1736 aaPredicted RBP15.01□□□□□ -0.01
LINC02253-202ENST00000560314 H0YIN7 160 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 SMC1BQ8NDV3 1235 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
LINC02253-202ENST00000560314 FER1L6Q2WGJ9 1857 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
LINC02253-202ENST00000560314 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
LINC02253-202ENST00000560314 IL6STP40189 918 aaPredicted RBP15□□□□□ -0.01
LINC02253-202ENST00000560314 RASSF7Q02833 373 aa15□□□□□ -0.01
LINC02253-202ENST00000560314 C2CD5Q86YS7 1000 aa15□□□□□ -0.01
LINC02253-202ENST00000560314 GLTPD2A6NH11 291 aa14.99□□□□□ -0.01
LINC02253-202ENST00000560314 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
LINC02253-202ENST00000560314 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
LINC02253-202ENST00000560314 KLRG1Q96E93 195 aa14.99□□□□□ -0.01
LINC02253-202ENST00000560314 FMNL2Q96PY5 1086 aa14.99□□□□□ -0.01
LINC02253-202ENST00000560314 RRAGCQ9HB90 399 aa14.99□□□□□ -0.01
LINC02253-202ENST00000560314 PDE6BP35913 854 aa14.98□□□□□ -0.01
LINC02253-202ENST00000560314 BRIP1Q9BX63 1249 aa14.98□□□□□ -0.01
LINC02253-202ENST00000560314 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
LINC02253-202ENST00000560314 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
LINC02253-202ENST00000560314 BICDL1Q6ZP65 573 aa14.97□□□□□ -0.01
LINC02253-202ENST00000560314 JMYQ8N9B5 988 aa14.97□□□□□ -0.01
LINC02253-202ENST00000560314 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
LINC02253-202ENST00000560314 NFKBIEO00221 500 aa14.96□□□□□ -0.01
LINC02253-202ENST00000560314 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
LINC02253-202ENST00000560314 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
LINC02253-202ENST00000560314 CNBD1Q8NA66 436 aa14.95□□□□□ -0.02
LINC02253-202ENST00000560314 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
LINC02253-202ENST00000560314 LTBP3Q9NS15 1303 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 BTBD11A6QL63 1104 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 CAMTA2O94983 1202 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 PRELPP51888 382 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 ST5P78524 1137 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 DPY19L2Q6NUT2 758 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 SETDB2Q96T68 719 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 RSPH6AQ9H0K4 717 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
LINC02253-202ENST00000560314 RGL2O15211 777 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 NPHP1O15259 732 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 CNKSR1Q969H4 720 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 ZNF622Q969S3 477 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC02253-202ENST00000560314 SLX4Q8IY92 1834 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 LAMB4A4D0S4 1761 aa14.93□□□□□ -0.02
LINC02253-202ENST00000560314 A1BGP04217 495 aa14.92□□□□□ -0.02
LINC02253-202ENST00000560314 STYK1Q6J9G0 422 aa14.92□□□□□ -0.02
LINC02253-202ENST00000560314 CLEC4GQ6UXB4 293 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms