RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 NOLC1Q14978 699 aaKnown RBP eCLIP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 HSP90AB2PQ58FF8 381 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 PIBF1Q8WXW3 757 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 RPAP1Q9BWH6 1393 aaPredicted RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 MON2Q7Z3U7 1717 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 FAM177BA6PVY3 158 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 MAP4K4O95819 1239 aaPredicted RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 HCLS1P14317 486 aaPredicted RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 UVSSAQ2YD98 709 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 SMAP1Q8IYB5 467 aaPredicted RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 TSPYL4Q9UJ04 414 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 CCDC61Q9Y6R9 512 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 SOX12O15370 315 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 DTNBO60941 627 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 CLSTN1O94985 981 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 ATP8B2P98198 1209 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 CCDC183Q5T5S1 534 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 FAM184AQ8NB25 1140 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 NECTIN2Q92692 538 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 CCDC94Q9BW85 323 aaPredicted RBP6.19□□□□□ -1.42
LRRC49-221ENST00000560107 IL1RAPL2Q9NP60 686 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 STAP2Q9UGK3 403 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 NRKQ7Z2Y5 1582 aa6.19□□□□□ -1.42
LRRC49-221ENST00000560107 NEO1Q92859 1461 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 SETD1AO15047 1707 aaKnown RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 C3P01024 1663 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 HSPA4P34932 840 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 NUTM1Q86Y26 1132 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 RICTORQ6R327 1708 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 SSH2Q76I76 1423 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 FKBP5Q13451 457 aaPredicted RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 MTHFSDQ2M296 383 aaKnown RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 FAM43BQ6ZT52 329 aaPredicted RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 TMEM87AQ8NBN3 555 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 PRIMPOLQ96LW4 560 aa6.18□□□□□ -1.42
LRRC49-221ENST00000560107 LRRFIP2Q9Y608 721 aaKnown RBP6.18□□□□□ -1.42
LRRC49-221ENST00000560107 METP08581 1390 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 A2ML1A8K2U0 1454 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 AP5Z1O43299 807 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 FIBPO43427 364 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 KDM4AO75164 1064 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 GNAI3P08754 354 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 SYT1P21579 422 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 HMGN5P82970 282 aaKnown RBP6.17□□□□□ -1.42
LRRC49-221ENST00000560107 FLIIQ13045 1269 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 RTF1Q92541 710 aaKnown RBP6.17□□□□□ -1.42
LRRC49-221ENST00000560107 STK31Q9BXU1 1019 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 SNX14Q9Y5W7 946 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 AKAP12Q02952 1782 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 ITSN1Q15811 1721 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 RIMS1Q86UR5 1692 aaKnown RBP6.17□□□□□ -1.42
LRRC49-221ENST00000560107 STX6O43752 255 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
LRRC49-221ENST00000560107 AK2P54819 239 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 UBE2HP62256 183 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 RASEFQ8IZ41 740 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 SPTLC3Q9NUV7 552 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 PEAK1Q9H792 1746 aa6.17□□□□□ -1.42
LRRC49-221ENST00000560107 MAP3K19Q56UN5 1328 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 TTC21BQ7Z4L5 1316 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 NUTM2FA1L443 756 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
LRRC49-221ENST00000560107 F13A1P00488 732 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 CPA1P15085 419 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 CBX1P83916 185 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 RUFY3Q7L099 469 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 TTC14Q96N46 770 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 FUCA2Q9BTY2 467 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 ZHX1Q9UKY1 873 aaPredicted RBP6.16□□□□□ -1.42
LRRC49-221ENST00000560107 LARGE1O95461 756 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 SPC24Q8NBT2 197 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 PSMD1Q99460 953 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 USP44Q9H0E7 712 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 KCNF1Q9H3M0 494 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 PYCARDQ9ULZ3 195 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 SMC3Q9UQE7 1217 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 KIF3AQ9Y496 699 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 RGPD1P0DJD0 1748 aa6.16□□□□□ -1.42
LRRC49-221ENST00000560107 RAD50Q92878 1312 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 SGSM2O43147 1006 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 ZSCAN20P17040 1043 aaPredicted RBP6.15□□□□□ -1.42
LRRC49-221ENST00000560107 DNM1Q05193 864 aaKnown RBP6.15□□□□□ -1.42
LRRC49-221ENST00000560107 ATP2B3Q16720 1220 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 PPP4R3BQ5MIZ7 849 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 PLCD4Q9BRC7 762 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 LSG1Q9H089 658 aaKnown RBP6.15□□□□□ -1.42
LRRC49-221ENST00000560107 BCL2L12Q9HB09 334 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 LIMCH1Q9UPQ0 1083 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 SPG7Q9UQ90 795 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 XRN1Q8IZH2 1706 aaKnown RBP6.15□□□□□ -1.42
LRRC49-221ENST00000560107 ACEP12821 1306 aa6.15□□□□□ -1.42
LRRC49-221ENST00000560107 NRXN3Q9Y4C0 1643 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 SURF6O75683 361 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms